Overview Annotation GWAS Evidence Associated genes

P38654

Metabolite ID
P38654
Deionized mass
114.0669 Da
Average m/z
115.0743
Average RT
19.1317
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)2.044e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)4.787e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)2.044e-12
Glyma.06G190800 hypothetical protein NA 1Chr06:16760534–16765691 (+)1.794e-11
Glyma.06G196600 hypothetical protein AT1G18660:AT1G18660:zinc finger (C3HC4-type RING finger) family protein 1Chr06:17679247–17694559 (+)1.13e-11
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)9.166e-11
Glyma.06G202300 SF3'H1 flavonoid 3'-hydroxylase AT5G07990:TT7:Cytochrome P450 superfamily protein 1Chr06:18731105–18738025 (+)5.192e-12
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)1.29e-11
Glyma.09G062200 hypothetical protein AT2G19350:AT2G19350:transmembrane protein (DUF872) 1Chr09:5901280–5902349 (+)2.411e-11
Glyma.09G065900 hypothetical protein NA 1Chr09:6419980–6421918 (+)5.492e-11
Glyma.09G066000 hypothetical protein NA 1Chr09:6431656–6439981 (-)5.492e-11
Glyma.09G066200 hypothetical protein AT5G57030:LUT2:Lycopene beta/epsilon cyclase protein 1Chr09:6475361–6486120 (+)5.492e-11
Glyma.11G241400 hypothetical protein AT4G40000:AT4G40000:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr11:33556332–33563163 (-)2.528e-11
Glyma.11G241900 hypothetical protein NA 1Chr11:33589346–33594428 (-)2.528e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)4.792e-12