Overview Annotation GWAS Evidence Associated genes

P38479

Metabolite ID
P38479
Deionized mass
338.0649 Da
Average m/z
339.0704
Average RT
19.0442
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
18
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

18 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G208500 hypothetical protein NA 2Chr14:47412802–47421148 (-)2.329e-18
Glyma.14G208900 hypothetical protein AT1G17200:AT1G17200:Uncharacterized protein family (UPF0497) 2Chr14:47451105–47454596 (-)4.956e-17
Glyma.14G209000 hypothetical protein NA 2Chr14:47461788–47463395 (+)4.956e-17
Glyma.14G210600 hypothetical protein AT5G17300:RVE1:Homeodomain-like superfamily protein 2Chr14:47557927–47561596 (-)6.947e-12
Glyma.14G211000 IDH1 AT1G65930:cICDH:cytosolic NADP+-dependent isocitrate dehydrogenase 2Chr14:47592207–47597473 (+)3.611e-14
Glyma.14G207700 hypothetical protein AT5G17380:AT5G17380:Thiamine pyrophosphate dependent pyruvate decarboxylase family protein 1Chr14:47365910–47369153 (+)2.644e-13
Glyma.14G207800 hypothetical protein AT3G46940:DUT1:DUTP-PYROPHOSPHATASE-LIKE 1 1Chr14:47370774–47371971 (+)3.211e-12
Glyma.14G208100 hypothetical protein AT3G02680:NBS1:nijmegen breakage syndrome 1 1Chr14:47381562–47388756 (-)3.211e-12
Glyma.14G208400 hypothetical protein AT5G16360:AT5G16360:NC domain-containing protein-like protein 1Chr14:47403978–47407155 (-)4.125e-14
Glyma.14G208600 hypothetical protein NA 1Chr14:47437358–47439597 (-)4.956e-17
Glyma.14G208700 hypothetical protein NA 1Chr14:47442866–47447625 (-)4.956e-17
Glyma.14G209100 hypothetical protein NA 1Chr14:47464224–47465243 (+)2.617e-13
Glyma.14G209200 hypothetical protein NA 1Chr14:47466917–47468975 (+)4.956e-17
Glyma.14G209600 hypothetical protein NA 1Chr14:47485565–47488948 (-)4.956e-17
Glyma.14G209800 hypothetical protein AT5G17240:SDG40:SET domain group 40 1Chr14:47508042–47511868 (+)2.617e-13
Glyma.14G209900 hypothetical protein NA 1Chr14:47515899–47521687 (+)2.617e-13
Glyma.14G210700 hypothetical protein NA 1Chr14:47577189–47584929 (+)4.576e-11
Glyma.14G211100 hypothetical protein AT1G65960:GAD2:glutamate decarboxylase 2 1Chr14:47603425–47609079 (+)3.611e-14