Overview Annotation GWAS Evidence Associated genes

P38433

Metabolite ID
P38433
Deionized mass
616.3927 Da
Average m/z
617.4008
Average RT
19.0232
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G030900 hypothetical protein AT1G60390:PG1:polygalacturonase 1__AT1G23760:JP630:BURP domain-containing protein 2Chr01:3234395–3237574 (+)3.376e-13
Glyma.06G195700 hypothetical protein AT1G18700:AT1G18700:DNAJ heat shock N-terminal domain-containing protein 2Chr06:17561357–17582927 (+)3.376e-13
Glyma.06G195900 hypothetical protein NA 1Chr06:17590340–17593393 (-)3.376e-13
Glyma.06G196200 hypothetical protein AT5G61380:TOC1:CCT motif -containing response regulator protein 1Chr06:17608369–17614484 (+)3.376e-13
Glyma.06G196300 hypothetical protein NA 1Chr06:17619743–17622580 (-)3.377e-13
Glyma.06G196500 hypothetical protein NA 1Chr06:17643394–17648103 (-)3.377e-13
Glyma.15G165800 hypothetical protein AT4G25940:AT4G25940:ENTH/ANTH/VHS superfamily protein 1Chr15:14417199–14423322 (-)4.084e-15
Glyma.15G165900 hypothetical protein AT4G30010:AT4G30010:ATP-dependent RNA helicase 1Chr15:14435565–14438937 (+)4.084e-15
Glyma.15G166100 hypothetical protein NA 1Chr15:14438131–14438935 (+)4.084e-15
Glyma.15G166800 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr15:14543290–14551892 (-)4.084e-15
Glyma.16G025200 hypothetical protein AT2G40190:LEW3:UDP-Glycosyltransferase superfamily protein 1Chr16:2430679–2435786 (-)3.376e-13
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)3.376e-13
Glyma.16G047900 hypothetical protein NA 1Chr16:4557271–4559586 (+)3.376e-13