Overview Annotation GWAS Evidence Associated genes

P38378

Metabolite ID
P38378
Deionized mass
217.1736 Da
Average m/z
218.1805
Average RT
18.9972
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
27
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

27 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)1.27e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)6.176e-14
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)9.7e-13
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)4.679e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)9.652e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.031e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)5.077e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)7.679e-12
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)7.679e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.291e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.447e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.447e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.447e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.447e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.128e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.675e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.143e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.143e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.607e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)6.176e-14
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.62e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.219e-13
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)4.858e-13
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)6.465e-11
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)6.248e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)1.68e-12
Glyma.16G196400 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 1Chr16:35782198–35790495 (-)2.28e-11