Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P38364

Metabolite ID
P38364
Deionized mass
571.7531 Da
Average m/z
572.7600
Average RT
18.9939
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
55
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

55 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)8.362e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)9.814e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.997e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.997e-12
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)1.482e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)2.874e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.816e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)7.15e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)6.249e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.382e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.619e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.619e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.886e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.336e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.336e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.336e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)5.078e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)6.985e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)4.561e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)7.104e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.964e-12
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)6.536e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)8.362e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)8.362e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)8.362e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)8.362e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.648e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.592e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.999e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)8.566e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)8.566e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)5.678e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)5.678e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)5.594e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)5.594e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)6.113e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.38e-15
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)5.7e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)3.602e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)3.602e-11
Glyma.14G072200 Ipk1 AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… 1Chr14:6059598–6063755 (-)3.123e-11
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 1Chr14:6486139–6488935 (+)3.465e-12
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 1Chr14:6498564–6506068 (+)3.465e-12
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 1Chr14:6508609–6520744 (-)3.465e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)4.702e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)5.18e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)9.814e-12
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)4.494e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)5.439e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)4.406e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)4.242e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.649e-11
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)1.423e-11
Glyma.18G079000 hypothetical protein NA 1Chr18:7595306–7600287 (-)4.772e-11
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)8.342e-11