Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P38334

Metabolite ID
P38334
Deionized mass
968.5286 Da
Average m/z
969.5347
Average RT
18.9811
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G166400 hypothetical protein AT4G36080:AT4G36080:phosphotransferases/inositol or phosphatidylinositol kinase 4Chr01:50404781–50436297 (-)5.446e-12
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)1.347e-12
Glyma.16G196900 hypothetical protein NA 3Chr16:35841279–35846894 (-)4.399e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 3Chr19:1134716–1143232 (+)2.215e-12
Glyma.04G096300 hypothetical protein NA 2Chr04:8635554–8654734 (+)1.837e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)4.052e-11
Glyma.16G189000 hypothetical protein NA 2Chr16:35160485–35167548 (-)2.992e-11
Glyma.16G203300 hypothetical protein AT5G62230:ERL1:ERECTA-like 1 2Chr16:36437330–36445131 (+)9.639e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)2.575e-13
Glyma.01G166300 hypothetical protein AT3G51230:AT3G51230:chalcone-flavanone isomerase family protein 1Chr01:50402188–50404181 (+)5.446e-12
Glyma.01G166600 hypothetical protein AT2G18000:TAF14:TBP-associated factor 14 1Chr01:50443699–50446896 (-)5.446e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.584e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.584e-12
Glyma.02G109400 hypothetical protein NA 1Chr02:10495046–10497626 (-)9.753e-11
Glyma.02G109900 hypothetical protein AT2G03150:emb1579:ATP/GTP-binding protein family 1Chr02:10547851–10557930 (+)9.753e-11
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)5.051e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.928e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)5.118e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)8.087e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)3.384e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)3.384e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.134e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)7.696e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)7.697e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)7.696e-11
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)6.296e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)4.621e-11
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)4.621e-11
Glyma.09G052400 hypothetical protein AT1G31040:AT1G31040:PLATZ transcription factor family protein 1Chr09:4583416–4589291 (-)8.781e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)2.851e-13
Glyma.09G052900 hypothetical protein NA 1Chr09:4652312–4653046 (+)6.622e-12
Glyma.09G054100 hypothetical protein NA 1Chr09:4780506–4788669 (-)6.622e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)4.052e-11
Glyma.14G149700 hypothetical protein AT1G77590:LACS9:long chain acyl-CoA synthetase 9 1Chr14:32271989–32301104 (+)2.268e-11
Glyma.14G150000 hypothetical protein AT1G21830:AT1G21830:uncharacterized protein 1Chr14:32314092–32316626 (+)2.581e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.577e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)1.493e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.977e-13
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)3.904e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)5.758e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)4.55e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.342e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.342e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.918e-11