Overview Annotation GWAS Evidence Associated genes

P38301

Metabolite ID
P38301
Deionized mass
762.4484 Da
Average m/z
763.4567
Average RT
18.9709
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
22
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

22 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 4Chr03:5113019–5121557 (+)4.345e-19
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)7.888e-15
Glyma.03G135300 hypothetical protein NA 1Chr03:35092248–35097578 (+)5.2e-11
Glyma.03G135600 hypothetical protein NA 1Chr03:35109981–35110632 (-)4.157e-11
Glyma.03G136000 hypothetical protein NA 1Chr03:35138670–35188160 (-)1.257e-11
Glyma.03G136100 hypothetical protein NA 1Chr03:35199503–35203392 (-)2.064e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)6.225e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)6.225e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)6.225e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.464e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.797e-13
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)1.446e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)1.446e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)6.869e-15
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)7.888e-15
Glyma.15G212800 hypothetical protein AT4G16340:SPK1:guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 1Chr15:33408140–33467420 (+)5.6e-12
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 1Chr15:48661607–48665946 (-)4.357e-11
Glyma.15G257500 hypothetical protein NA 1Chr15:48713244–48717192 (+)7.949e-12
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)1.852e-13
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)6.665e-11
Glyma.20G025700 hypothetical protein AT1G13820:AT1G13820:alpha/beta-Hydrolases superfamily protein 1Chr20:2813089–2825575 (+)8.379e-11
Glyma.20G152300 hypothetical protein NA 1Chr20:39117272–39119456 (+)3.184e-12