Overview Annotation GWAS Evidence Associated genes

P38240

Metabolite ID
P38240
Deionized mass
456.1954 Da
Average m/z
457.2054
Average RT
18.9319
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.114e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)6.939e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)6.939e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)6.939e-11
Glyma.05G220900 hypothetical protein NA 1Chr05:40040654–40043504 (+)3.314e-15
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)3.364e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.367e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)4.267e-12
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)1.068e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.642e-11
Glyma.19G137700 hypothetical protein NA 1Chr19:39904075–39916887 (+)8.63e-11