Overview Annotation GWAS Evidence Associated genes

P38238

Metabolite ID
P38238
Deionized mass
392.2503 Da
Average m/z
393.2577
Average RT
18.9315
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)3.425e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)6.025e-12
Glyma.01G181000 hypothetical protein NA 1Chr01:51703710–51704994 (-)6.118e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)4.135e-11
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)3.196e-11
Glyma.04G018000 hypothetical protein AT5G42310:AT5G42310:Pentatricopeptide repeat (PPR-like) superfamily protein 1Chr04:1402993–1407323 (-)3.704e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)6.025e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)6.025e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)6.025e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)6.025e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.479e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)3.366e-11
Glyma.14G135100 hypothetical protein AT4G31540:EXO70G1:exocyst subunit exo70 family protein G1 1Chr14:23623422–23626499 (-)7.145e-13
Glyma.14G135400 hypothetical protein AT2G24570:WRKY17:WRKY DNA-binding protein 17 1Chr14:23729201–23732285 (-)2.052e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)5.491e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)3.425e-11