Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P38222

Metabolite ID
P38222
Deionized mass
110.1089 Da
Average m/z
111.1159
Average RT
18.9220
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
64
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

64 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)6.167e-13
Glyma.01G045600 hypothetical protein NA 2Chr01:5242432–5245038 (-)3.506e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)3.487e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.185e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)6.37e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.169e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)2.741e-13
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)5.398e-11
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)3.506e-11
Glyma.03G041900 hypothetical protein NA 1Chr03:5313339–5315847 (-)8.175e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)2.304e-12
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)7.6e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)8.515e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.537e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.442e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.043e-13
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)3.597e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.478e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.487e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)3.487e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.487e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)3.487e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)7.538e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.993e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)7.387e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)5.083e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)5.518e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)7.883e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)7.883e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)7.883e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)7.883e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)4.727e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.057e-13
Glyma.10G274200 hypothetical protein NA 1Chr10:49704427–49706416 (+)6.477e-11
Glyma.10G274300 COL22 AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein__AT1G68520:BBX14:B-box type zinc fing… 1Chr10:49716241–49718424 (-)6.477e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)6.825e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.838e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.838e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.838e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.838e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)3.789e-13
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)4.318e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)1.505e-12
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)6.19e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.425e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)6.37e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.169e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)8.18e-13
Glyma.15G124200 hypothetical protein AT1G50500:HIT1:Membrane trafficking VPS53 family protein 1Chr15:9861709–9873220 (+)5.578e-11
Glyma.15G124300 hypothetical protein NA 1Chr15:9875069–9875810 (+)5.578e-11
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)3.796e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)6.404e-13
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)1.038e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)4.457e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)3.623e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)7.505e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)9.613e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)9.613e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)7.5e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)5.398e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)8.829e-11
Glyma.18G238000 hypothetical protein AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein 1Chr18:52679724–52682816 (+)6.307e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.788e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.788e-13