Overview Annotation GWAS Evidence Associated genes

P38220

Metabolite ID
P38220
Deionized mass
162.0512 Da
Average m/z
325.1112
Average RT
18.9218
Adduct
[2M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G151500 hypothetical protein AT2G47990:SWA1:transducin family protein / WD-40 repeat family protein 1Chr02:15586732–15588774 (+)1.357e-12
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)2.565e-11
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)5.177e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.028e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.028e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.028e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.028e-11
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)2.482e-11
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)2.482e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)4.885e-11
Glyma.10G082200 hypothetical protein NA 1Chr10:9967027–9970045 (-)6.514e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)7.332e-12