Overview Annotation GWAS Evidence Associated genes

P38204

Metabolite ID
P38204
Deionized mass
676.2396 Da
Average m/z
677.2475
Average RT
18.9127
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
19
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

19 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)4.96e-11
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)3.802e-11
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 2Chr06:49315918–49324382 (+)2.346e-14
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.324e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.324e-11
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)2.346e-14
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)4.96e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)4.96e-11
Glyma.08G150700 hypothetical protein AT2G44500:AT2G44500:O-fucosyltransferase family protein 1Chr08:11603469–11607610 (+)2.233e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.918e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.918e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.324e-11
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)5.215e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)7.234e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)3.802e-11
Glyma.17G218800 Peptidyl-prolyl cis-trans isomerase CYP57 AT4G33060:AT4G33060:Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 1Chr17:37027171–37033720 (-)4.532e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)3.393e-11
Glyma.18G201900 hypothetical protein NA 1Chr18:48192545–48196624 (-)1.972e-11
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)8.711e-12