Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P38187

Metabolite ID
P38187
Deionized mass
341.0877 Da
Average m/z
342.0957
Average RT
18.9047
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
46
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

46 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 5Chr04:7187985–7192897 (+)5.089e-13
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)2.36e-12
Glyma.17G217900 hypothetical protein NA 3Chr17:36771760–36778616 (-)1.08e-11
Glyma.09G210000 hypothetical protein AT5G45620:AT5G45620:Proteasome component (PCI) domain protein 2Chr09:43422744–43428344 (-)6.616e-12
Glyma.09G210200 hypothetical protein AT1G31940:AT1G31940:cystic fibrosis transmembrane conductance regulator 2Chr09:43432969–43437575 (-)6.616e-12
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)8.194e-12
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 2Chr18:55076548–55086297 (+)1.575e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)4.508e-11
Glyma.02G222400 hypothetical protein AT2G36460:FBA6:Aldolase superfamily protein 1Chr02:40998557–41001678 (-)9.43e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.749e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.124e-11
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)2.601e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.008e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.104e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.671e-13
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)6.63e-11
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)6.63e-11
Glyma.08G113900 hypothetical protein AT3G13560:AT3G13560:O-Glycosyl hydrolases family 17 protein 1Chr08:8730526–8734718 (-)8.607e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.491e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)5.436e-11
Glyma.09G209800 hypothetical protein NA 1Chr09:43411309–43411773 (+)3.458e-11
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)2.111e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)2.562e-11
Glyma.11G061800 hypothetical protein NA 1Chr11:4632831–4633552 (+)9.28e-11
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)6.47e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.583e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.583e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)2.36e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)2.725e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.806e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)8.806e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)8.806e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)4.429e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)8.023e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)8.023e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)8.023e-11
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)1.969e-13
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)6.315e-12
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)7.705e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.528e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)5.695e-11
Glyma.17G218400 hypothetical protein NA 1Chr17:36900654–36906204 (+)9.193e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)1.117e-11
Glyma.18G265500 hypothetical protein AT5G39250:AT5G39250:F-box family protein 1Chr18:55019514–55022070 (-)6.385e-12
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.084e-13
Glyma.18G301600 hypothetical protein AT2G33490:AT2G33490:hydroxyproline-rich glycoprotein family protein 1Chr18:57939468–57945328 (+)9.838e-11