Overview Annotation GWAS Evidence Associated genes

P38179

Metabolite ID
P38179
Deionized mass
904.4722 Da
Average m/z
905.4835
Average RT
18.9006
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G059200 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 6Chr07:5284646–5293001 (-)2.203e-15
Glyma.07G059300 hypothetical protein AT2G39780:RNS2:ribonuclease 2 3Chr07:5293201–5300088 (-)1.692e-14
Glyma.07G058900 hypothetical protein NA 2Chr07:5268461–5272348 (+)8.401e-16
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)1.009e-11
Glyma.03G142200 hypothetical protein AT3G47370:AT3G47370:Ribosomal protein S10p/S20e family protein 1Chr03:35800933–35802532 (+)5.09e-11
Glyma.03G145600 hypothetical protein NA 1Chr03:36103398–36107031 (+)7.288e-11
Glyma.07G058600 hypothetical protein AT5G12230:MED19A:mediator of RNA polymerase II transcription subunit 19a-like protein 1Chr07:5240996–5247125 (-)3.164e-16
Glyma.07G058700 hypothetical protein AT1G30240:AT1G30240:proline-, glutamic acid/leucine-rich protein 1Chr07:5251199–5260710 (+)3.164e-16
Glyma.07G059100 hypothetical protein NA 1Chr07:5282519–5283075 (-)2.203e-15
Glyma.07G059400 hypothetical protein NA 1Chr07:5305964–5316002 (+)5.078e-12
Glyma.07G059600 hypothetical protein AT2G04039:AT2G04039:DUF2996 family protein 1Chr07:5317552–5319355 (-)1.037e-12
Glyma.07G073000 hypothetical protein AT3G61250:MYB17:myb domain protein 17 1Chr07:6650375–6652910 (+)3.188e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)1.1e-11
Glyma.15G233600 hypothetical protein NA 1Chr15:43971478–43972713 (+)2.713e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)1.16e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)6.958e-11