Overview Annotation GWAS Evidence Associated genes

P38063

Metabolite ID
P38063
Deionized mass
533.3139 Da
Average m/z
534.3194
Average RT
18.8587
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)2.399e-12
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)2.829e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)2.399e-12
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)2.399e-12
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)2.829e-12
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)2.683e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)6.407e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.406e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.406e-12
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)3.087e-12
Glyma.18G100200 hypothetical protein NA 1Chr18:10512806–10522231 (+)1.461e-11