Overview Annotation GWAS Evidence Associated genes

P38029

Metabolite ID
P38029
Deionized mass
480.2308 Da
Average m/z
481.2349
Average RT
18.8506
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
5
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

5 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G257400 hypothetical protein AT3G55960:AT3G55960:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr02:44396026–44400575 (-)2.615e-23
Glyma.04G226400 hypothetical protein AT4G27585:AT4G27585:SPFH/Band 7/PHB domain-containing membrane-associated protein family 1Chr04:49605506–49609864 (+)3.637e-12
Glyma.05G146400 hypothetical protein AT1G67490:GCS1:glucosidase 1 1Chr05:34016671–34026994 (+)1.667e-14
Glyma.07G046800 hypothetical protein AT1G53730:SRF6:STRUBBELIG-receptor family 6 1Chr07:3910605–3918461 (-)9.019e-13
Glyma.07G058900 hypothetical protein NA 1Chr07:5268461–5272348 (+)3.637e-12