Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P37933

Metabolite ID
P37933
Deionized mass
940.5031 Da
Average m/z
941.5055
Average RT
18.8386
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 3Chr03:169480–172727 (+)8.371e-12
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)3.573e-12
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)4.524e-14
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 2Chr06:50401945–50408153 (+)5.68e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)9.385e-15
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)8.767e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)2.109e-13
Glyma.01G016500 hypothetical protein AT4G25960:ABCB2:P-glycoprotein 2 1Chr01:1573790–1583422 (+)5.56e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)7.049e-12
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)1.445e-13
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.865e-13
Glyma.03G013500 hypothetical protein AT1G01700:ROPGEF2:RHO guanyl-nucleotide exchange factor 2 1Chr03:1370977–1375024 (+)3.455e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)9.012e-14
Glyma.03G135600 hypothetical protein NA 1Chr03:35109981–35110632 (-)2.029e-12
Glyma.03G136000 hypothetical protein NA 1Chr03:35138670–35188160 (-)2.956e-14
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)4.439e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)4.439e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)4.439e-11
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)2.851e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)8.507e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.642e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)3.625e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)9.062e-12
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)9.062e-12
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)9.062e-12
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)5.832e-11
Glyma.13G149700 hypothetical protein AT3G10040:AT3G10040:sequence-specific DNA binding transcription factor 1Chr13:26321941–26324172 (+)1.37e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.667e-13
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)5.247e-12
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)6.5e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)8.767e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.109e-13
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.227e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)7.266e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.227e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.227e-13
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.128e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.626e-13
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)3.316e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)1.428e-12
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)7.366e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.818e-18
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.819e-18