Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P37924

Metabolite ID
P37924
Deionized mass
633.3912 Da
Average m/z
634.4000
Average RT
18.8358
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
78
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

78 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 7Chr16:36856833–36863994 (-)1.349e-19
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 3Chr16:36806718–36809299 (+)2.72e-18
Glyma.09G018700 hypothetical protein NA 2Chr09:1470411–1472672 (-)2.154e-14
Glyma.09G058900 hypothetical protein NA 2Chr09:5397968–5404650 (-)1.298e-12
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)5.231e-13
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 2Chr16:36871978–36878151 (-)1.703e-13
Glyma.20G013100 hypothetical protein NA 2Chr20:1134080–1135710 (-)1.042e-12
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)2.021e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)4.919e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)4.919e-12
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)2.992e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)5.94e-12
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)8.185e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)2.751e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.469e-12
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)1.416e-13
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)3.314e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)3.53e-13
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.09e-14
Glyma.08G113900 hypothetical protein AT3G13560:AT3G13560:O-Glycosyl hydrolases family 17 protein 1Chr08:8730526–8734718 (-)8.378e-11
Glyma.08G114000 hypothetical protein AT5G46430:AT5G46430:Ribosomal protein L32e 1Chr08:8737686–8739958 (+)8.433e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)3.209e-11
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)3.104e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)2.655e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)2.655e-11
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)7.112e-13
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)3.334e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)5.114e-11
Glyma.09G019300 hypothetical protein AT1G52520:FRS6:FAR1-related sequence 6 1Chr09:1514278–1517148 (+)7.56e-14
Glyma.09G019800 VAMP721D vesicle-associated membrane protein 721d NA 1Chr09:1540660–1547761 (+)1.616e-14
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.855e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.992e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.992e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.992e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.992e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.482e-11
Glyma.10G082100 hypothetical protein AT3G05680:EMB2016:embryo defective 2016 1Chr10:9934486–9960586 (-)1.942e-11
Glyma.10G186500 PT7 NA 1Chr10:41946209–41950274 (-)2.021e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)9.293e-13
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)5.015e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.846e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.846e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.846e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.846e-11
Glyma.11G061000 hypothetical protein AT4G37210:AT4G37210:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr11:4576441–4579697 (+)3.857e-11
Glyma.11G061800 hypothetical protein NA 1Chr11:4632831–4633552 (+)4.88e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)3.572e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)3.572e-13
Glyma.13G197700 hypothetical protein AT5G38730:AT5G38730:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr13:31174654–31180595 (-)6.305e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.448e-14
Glyma.14G132100 hypothetical protein NA 1Chr14:22626936–22629212 (+)2.624e-11
Glyma.15G111000 hypothetical protein AT1G62305:AT1G62305:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein__AT1G11940:AT1G11940:Cor… 1Chr15:8692505–8697919 (-)4.97e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.425e-12
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)9.216e-12
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)1.464e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)7.801e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)2.268e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)7.232e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)7.232e-11
Glyma.16G167800 hypothetical protein AT1G03190:UVH6:RAD3-like DNA-binding helicase protein 1Chr16:32772162–32778480 (+)9.157e-11
Glyma.16G207700 hypothetical protein AT4G15093:LigB:catalytic LigB subunit of aromatic ring-opening dioxygenase family 1Chr16:36739878–36743378 (-)2.701e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)5.656e-17
Glyma.16G208100 hypothetical protein AT5G23530:CXE18:carboxyesterase 18 1Chr16:36776806–36778169 (+)7.731e-12
Glyma.16G208400 hypothetical protein NA 1Chr16:36789890–36801967 (-)6.985e-13
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)7.648e-13
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)7.27e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)7.27e-12
Glyma.17G038400 hypothetical protein AT3G17330:ECT6:evolutionarily conserved C-terminal region 6 1Chr17:2836787–2841979 (-)8.922e-11
Glyma.17G038500 hypothetical protein NA 1Chr17:2843533–2853547 (-)8.922e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)4.389e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.586e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)1.29e-11
Glyma.19G127700 hypothetical protein AT5G12250:TUB6:beta-6 tubulin 1Chr19:38632803–38635633 (+)6.939e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.243e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)6.453e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.246e-13
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)2.395e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)6.175e-12