Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P37768

Metabolite ID
P37768
Deionized mass
838.4116 Da
Average m/z
839.4165
Average RT
18.7696
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
55
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

55 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 4Chr13:31727841–31735910 (-)8.958e-14
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)7.603e-14
Glyma.17G217900 hypothetical protein NA 3Chr17:36771760–36778616 (-)2.741e-11
Glyma.06G209300 hypothetical protein NA 2Chr06:20573671–20581076 (-)3.372e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)9.285e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)1.203e-13
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 2Chr13:31720004–31725252 (+)2.107e-13
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)3.536e-12
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)5.794e-12
Glyma.02G107400 hypothetical protein NA 1Chr02:10245905–10246706 (-)3.467e-11
Glyma.03G258000 hypothetical protein AT4G00980:AT4G00980:zinc knuckle (CCHC-type) family protein 1Chr03:45241396–45246507 (+)2.277e-12
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)2.744e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)3.775e-11
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)4.549e-14
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)5.721e-16
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)3.504e-15
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)3.504e-15
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.923e-14
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)9.798e-14
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)9.798e-14
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)9.798e-14
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.221e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.138e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.891e-16
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)7.09e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)7.09e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)7.09e-11
Glyma.06G207900 hypothetical protein NA 1Chr06:20278974–20282107 (-)3.381e-11
Glyma.06G208000 hypothetical protein AT1G74000:SS3:strictosidine synthase 3 1Chr06:20286288–20288769 (+)3.381e-11
Glyma.06G208900 hypothetical protein NA 1Chr06:20515068–20521900 (-)3.381e-11
Glyma.06G209400 hypothetical protein NA 1Chr06:20622369–20629712 (+)3.381e-11
Glyma.06G209600 hypothetical protein AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:20638577–20641470 (+)3.381e-11
Glyma.06G210000 hypothetical protein NA 1Chr06:20706632–20708144 (-)3.381e-11
Glyma.06G210100 hypothetical protein NA 1Chr06:20725481–20728890 (-)3.381e-11
Glyma.06G210400 hypothetical protein AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit 1Chr06:20768340–20778709 (-)3.381e-11
Glyma.06G210900 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 1Chr06:20942818–20945744 (+)3.381e-11
Glyma.06G211500 hypothetical protein AT5G19950:AT5G19950:tudor domain protein (DUF1767) 1Chr06:21104409–21114116 (-)3.381e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)9.285e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)9.285e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)9.285e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)9.285e-12
Glyma.08G139300 hypothetical protein AT2G22125:CSI1:binding protein 1Chr08:10653279–10664544 (-)1.005e-12
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)8.382e-11
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)1.695e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.7e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.7e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)4.782e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)7.603e-14
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)1.488e-12
Glyma.13G203600 hypothetical protein AT5G13490:AAC2:ADP/ATP carrier 2 1Chr13:31753843–31756013 (-)8.958e-14
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)7.16e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)2.962e-11
Glyma.16G205600 hypothetical protein AT4G10280:AT4G10280:RmlC-like cupins superfamily protein__AT4G10290:AT4G10290:RmlC-like cupins superfamily protein 1Chr16:36633000–36634978 (+)2.681e-13
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)4.12e-11
Glyma.17G218400 hypothetical protein NA 1Chr17:36900654–36906204 (+)8.853e-11