Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P37496

Metabolite ID
P37496
Deionized mass
284.0675 Da
Average m/z
285.0753
Average RT
18.6392
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
96
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

96 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G166400 hypothetical protein AT4G36080:AT4G36080:phosphotransferases/inositol or phosphatidylinositol kinase 4Chr01:50404781–50436297 (-)4.347e-11
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)9.285e-12
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)3.03e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)2.481e-12
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)2.84e-11
Glyma.06G090100 hypothetical protein NA 2Chr06:6985471–6996418 (+)2.597e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.48e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)1.31e-16
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.358e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.358e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.141e-13
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)1.852e-11
Glyma.01G166300 hypothetical protein AT3G51230:AT3G51230:chalcone-flavanone isomerase family protein 1Chr01:50402188–50404181 (+)4.347e-11
Glyma.01G166600 hypothetical protein AT2G18000:TAF14:TBP-associated factor 14 1Chr01:50443699–50446896 (-)4.347e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)6.991e-16
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)6.991e-16
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)1.84e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.081e-11
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)8.471e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)7.922e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.585e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.327e-12
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)3.702e-11
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)5.657e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)4.635e-11
Glyma.06G090200 hypothetical protein NA 1Chr06:6994887–6999658 (-)2.597e-12
Glyma.06G090300 hypothetical protein AT1G09980:AT1G09980:Putative serine esterase family protein__AT1G58350:ZW18:Putative serine esterase family protein 1Chr06:7005790–7019054 (+)2.597e-12
Glyma.06G090400 hypothetical protein AT5G49650:XK-2:xylulose kinase-2 1Chr06:7022045–7025738 (+)2.597e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)5.561e-16
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)5.561e-16
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)5.561e-16
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.376e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)1.322e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)7.208e-13
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)2.271e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)2.618e-11
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)2.618e-11
Glyma.08G330600 hypothetical protein NA 1Chr08:44828516–44836550 (-)3.982e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)7.28e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)3.82e-12
Glyma.10G233200 hypothetical protein NA 1Chr10:46244187–46249491 (-)6.148e-11
Glyma.10G233700 hypothetical protein AT3G49050:AT3G49050:alpha/beta-Hydrolases superfamily protein 1Chr10:46285252–46289700 (-)6.148e-11
Glyma.11G094700 hypothetical protein AT5G08280:HEMC:hydroxymethylbilane synthase 1Chr11:7190632–7195838 (-)2.576e-15
Glyma.11G095000 hypothetical protein NA 1Chr11:7206492–7209711 (-)4.803e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)9.6e-12
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)1.592e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)1.592e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)1.592e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.717e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.717e-13
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)7.192e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)7.192e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)3.434e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.289e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.31e-16
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)3.727e-14
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.197e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.197e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.358e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)6.368e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)3.667e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)1.056e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)5.695e-13
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.123e-11
Glyma.14G190800 hypothetical protein NA 1Chr14:45566998–45568488 (-)5.422e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.141e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.508e-12
Glyma.15G229600 hypothetical protein AT5G27110:AT5G27110:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr15:43046109–43063832 (+)5.413e-11
Glyma.16G069300 hypothetical protein AT3G01600:NAC044:NAC domain containing protein 44 1Chr16:6914905–6920531 (+)4.469e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)3.03e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)3.03e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)3.03e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)3.03e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)1.441e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.284e-12
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)2.84e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)2.84e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)2.256e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.348e-12
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)2.868e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)8.989e-12
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)7.98e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.178e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)2.149e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)2.149e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.284e-13
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)2.615e-13
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)2.753e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)5.561e-13
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)1.907e-11
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)8.332e-11
Glyma.19G129500 hypothetical protein AT2G41160:AT2G41160:Ubiquitin-associated (UBA) protein 1Chr19:38884116–38901744 (-)1.399e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)1.251e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)7.815e-12
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)1.26e-11
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)8.227e-11