Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P36888

Metabolite ID
P36888
Deionized mass
514.0184 Da
Average m/z
515.0250
Average RT
18.3554
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
41
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

41 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)2.044e-14
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)2.082e-12
Glyma.04G129500 hypothetical protein AT3G21060:RBL:Transducin/WD40 repeat-like superfamily protein 2Chr04:18096368–18109438 (+)1.572e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)6.537e-12
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)5.803e-14
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)8.862e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.867e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.867e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)2.835e-12
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)7.329e-11
Glyma.04G124600 hypothetical protein NA 1Chr04:16329983–16332898 (-)3.947e-11
Glyma.04G129600 hypothetical protein NA 1Chr04:18110585–18112762 (+)1.572e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)4.718e-11
Glyma.06G131700 hypothetical protein NA 1Chr06:10850105–10855203 (+)3.471e-11
Glyma.06G132100 hypothetical protein NA 1Chr06:10873977–10879178 (-)3.471e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)6.537e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)6.537e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)6.537e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)6.537e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)1.966e-12
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)2.758e-12
Glyma.13G237900 hypothetical protein NA 1Chr13:34809361–34816888 (-)4.391e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)1.479e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)5.479e-13
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)1.964e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)2.082e-12
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)2.082e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)3.671e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.507e-15
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.346e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.346e-12
Glyma.18G039500 hypothetical protein AT5G37770:TCH2:EF hand calcium-binding protein family 1Chr18:3218263–3219353 (+)1.933e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.124e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)1.124e-12
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1134716–1143232 (+)8.891e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.18e-14
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.18e-14
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)1.304e-11
Glyma.19G216500 hypothetical protein AT3G62390:TBL6:TRICHOME BIREFRINGENCE-LIKE 6 1Chr19:46951591–46954520 (+)6.042e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.315e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.592e-12