Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P36856

Metabolite ID
P36856
Deionized mass
920.2028 Da
Average m/z
921.2079
Average RT
18.3400
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
124
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

124 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 4Chr19:1134716–1143232 (+)5.549e-14
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)1.75e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)6.975e-13
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)1.766e-11
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)1.614e-11
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)4.017e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)5.885e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)4.276e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)3.739e-14
Glyma.14G171400 hypothetical protein NA 2Chr14:42398866–42404627 (+)3.073e-12
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)4.173e-13
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)1.249e-16
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)2.864e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 2Chr19:1155711–1161298 (-)8.914e-22
Glyma.19G012300 hypothetical protein NA 2Chr19:1165111–1173031 (-)8.914e-22
Glyma.01G010200 hypothetical protein AT1G32060:PRK:phosphoribulokinase 1Chr01:993024–997480 (-)1.882e-11
Glyma.01G010400 SLTI248 DEAD-box RNA helicase AT1G31970:STRS1:DEA(D/H)-box RNA helicase family protein 1Chr01:1009200–1013846 (+)4.194e-12
Glyma.01G045600 hypothetical protein NA 1Chr01:5242432–5245038 (-)1.048e-13
Glyma.01G046600 hypothetical protein AT1G14280:PKS2:phytochrome kinase substrate 2 1Chr01:5379316–5382027 (-)4.455e-11
Glyma.01G099100 hypothetical protein NA 1Chr01:33017228–33023840 (+)2.917e-12
Glyma.01G099600 hypothetical protein AT3G53930:AT3G53930:Protein kinase superfamily protein__AT2G37840:AT2G37840:Protein kinase superfamily protein 1Chr01:33115843–33125726 (-)2.917e-12
Glyma.01G099900 hypothetical protein NA 1Chr01:33275414–33282430 (+)2.917e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.387e-12
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)7.894e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)4.005e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)2.19e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.856e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.856e-13
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)9.8e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 1Chr03:1875182–1876855 (+)3.519e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)2.773e-14
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)1.104e-12
Glyma.04G124600 hypothetical protein NA 1Chr04:16329983–16332898 (-)3.537e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)3.223e-16
Glyma.04G190700 hypothetical protein NA 1Chr04:46143583–46146881 (+)1.582e-11
Glyma.04G190800 hypothetical protein AT5G07460:PMSR2:peptidemethionine sulfoxide reductase 2 1Chr04:46143080–46147709 (-)1.582e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)2.316e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)1.517e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)6.091e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.176e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.262e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.781e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.781e-11
Glyma.06G131700 hypothetical protein NA 1Chr06:10850105–10855203 (+)5.272e-14
Glyma.06G132100 hypothetical protein NA 1Chr06:10873977–10879178 (-)5.272e-14
Glyma.06G175200 SEOd NA 1Chr06:14822478–14829186 (-)7.895e-12
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)9.682e-13
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)6.859e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)5.748e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)6.859e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)6.859e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)5.748e-12
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)9.763e-11
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)8.827e-11
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)2.365e-11
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)2.365e-11
Glyma.07G097000 hypothetical protein AT1G19670:CLH1:chlorophyllase 1 1Chr07:9118318–9120182 (-)8.62e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)5.885e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)5.885e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)5.885e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)5.885e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)3.965e-11
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)3.965e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)7.935e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.181e-11
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)3.338e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)5.846e-12
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)6.464e-12
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)4.808e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.079e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.079e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.118e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)2.86e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)3.244e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.424e-14
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)9.233e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)9.233e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)4.895e-15
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)4.812e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)3.74e-14
Glyma.14G171200 hypothetical protein AT1G19970:AT1G19970:ER lumen protein retaining receptor family protein 1Chr14:42387905–42389129 (+)3.073e-12
Glyma.15G047100 hypothetical protein AT1G71240:AT1G71240:chromosome-partitioning protein, putative (DUF639) 1Chr15:3736217–3746037 (+)4.45e-12
Glyma.15G047800 hypothetical protein AT1G33270:AT1G33270:Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein 1Chr15:3777567–3783739 (+)4.45e-12
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)5.006e-12
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)5.006e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.52e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)8.666e-14
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)6.424e-11
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)3.123e-12
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)3.355e-11
Glyma.16G075600 hypothetical protein AT4G19450:AT4G19450:Major facilitator superfamily protein 1Chr16:7617667–7623067 (-)9.514e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)1.75e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)1.75e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)1.75e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)1.75e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)9.139e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)5.871e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.914e-13
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)1.766e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)1.766e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.67e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.929e-13
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)8.484e-11
Glyma.16G158300 hypothetical protein AT5G43140:AT5G43140:Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 1Chr16:31859405–31862567 (+)5.49e-11
Glyma.16G158400 hypothetical protein AT5G48100:TT10:Laccase/Diphenol oxidase family protein 1Chr16:31863760–31867327 (-)5.49e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)2.968e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)2.968e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)4.497e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)4.496e-11
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)4.497e-11
Glyma.18G100200 hypothetical protein NA 1Chr18:10512806–10522231 (+)4.497e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)1.312e-12
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)8.375e-12
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)6.164e-11
Glyma.18G301600 hypothetical protein AT2G33490:AT2G33490:hydroxyproline-rich glycoprotein family protein 1Chr18:57939468–57945328 (+)4.042e-11
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)2.641e-11
Glyma.19G009000 hypothetical protein AT5G14780:FDH:formate dehydrogenase 1Chr19:860974–865476 (+)3.373e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.249e-16
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)6.962e-12
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)1.171e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)8.759e-14
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)6.299e-13
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.682e-14
Glyma.20G021600 PT12 AT1G20860:PHT1;8:phosphate transporter 1;8__AT1G76430:PHT1;9:phosphate transporter 1;9 1Chr20:2196534–2205616 (+)8.086e-11