Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P36855

Metabolite ID
P36855
Deionized mass
477.1254 Da
Average m/z
478.1321
Average RT
18.3400
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.862e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.862e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)8.199e-11
Glyma.02G293100 hypothetical protein AT3G20800:AT3G20800:Cell differentiation, Rcd1-like protein 1Chr02:47183443–47188007 (-)4.664e-11
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)1.899e-13
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)4.739e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)3.075e-12
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 1Chr04:7187985–7192897 (+)8.478e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)4.518e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)7.49e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.061e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)7.55e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)5.741e-12
Glyma.08G150700 hypothetical protein AT2G44500:AT2G44500:O-fucosyltransferase family protein 1Chr08:11603469–11607610 (+)1.949e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)9.111e-11
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)9.472e-12
Glyma.10G037300 hypothetical protein AT3G54670:TTN8:Structural maintenance of chromosomes (SMC) family protein 1Chr10:3270545–3283318 (-)6.821e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.271e-13
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.271e-13
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.271e-13
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.271e-13
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)4.41e-14
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.335e-15
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)3.346e-11
Glyma.11G037100 hypothetical protein AT2G35660:CTF2A:FAD/NAD(P)-binding oxidoreductase family protein 1Chr11:2678678–2681764 (-)9.982e-11
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)5.426e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)3.497e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)3.497e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)3.497e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)6.21e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)7.637e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)2.035e-12
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)2.035e-12
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)3.194e-11
Glyma.17G006300 hypothetical protein AT4G16380:AT4G16380:Heavy metal transport/detoxification superfamily protein 1Chr17:586135–588091 (+)4.885e-14
Glyma.17G007000 hypothetical protein NA 1Chr17:615525–616722 (+)4.885e-14
Glyma.17G007300 hypothetical protein AT4G16440:NAR1:ferredoxin hydrogenase 1Chr17:621626–627757 (-)4.885e-14
Glyma.17G007700 hypothetical protein NA 1Chr17:653891–655878 (+)9.217e-13
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)4.422e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)9.216e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.248e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.248e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)2.081e-13
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)1.319e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.938e-13