Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P36652

Metabolite ID
P36652
Deionized mass
373.1820 Da
Average m/z
374.1909
Average RT
18.2462
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.393e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)7.162e-12
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)3.975e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)9.392e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)2.684e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.015e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.333e-12
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)7.592e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)3.534e-11
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)3.941e-11
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)3.941e-11
Glyma.08G117700 hypothetical protein NA 1Chr08:9080318–9084658 (-)8.149e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.393e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.393e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.393e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.393e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)7.538e-11
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)4.798e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)5.792e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)5.792e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)5.792e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)5.792e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.204e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.165e-13
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.128e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.745e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)6.944e-14
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)6.944e-14
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)6.944e-14
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)6.944e-14
Glyma.11G061800 hypothetical protein NA 1Chr11:4632831–4633552 (+)1.748e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.697e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)7.376e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)7.376e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)7.23e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)7.639e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)7.639e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)7.162e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)4.238e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)6.471e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)5.062e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)4.114e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)4.122e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)4.221e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)1.442e-11