Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P36523

Metabolite ID
P36523
Deionized mass
704.3234 Da
Average m/z
705.3293
Average RT
18.1825
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
62
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

62 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)1.402e-12
Glyma.08G123500 hypothetical protein NA 3Chr08:9494946–9505931 (-)1.684e-15
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)1.95e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 2Chr03:169480–172727 (+)8.766e-11
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)1.684e-15
Glyma.15G140700 hypothetical protein NA 2Chr15:11520847–11522863 (-)9.543e-11
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)8.642e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.579e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.579e-11
Glyma.02G044600 hypothetical protein NA 1Chr02:4131829–4134877 (+)6.379e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)9.673e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.978e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)6.247e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)7.273e-12
Glyma.05G149200 hypothetical protein NA 1Chr05:34347910–34353885 (-)4.376e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)1.464e-12
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)1.464e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.109e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.525e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.795e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.491e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.684e-15
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.684e-15
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)9.813e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.684e-15
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)1.031e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)1.031e-11
Glyma.08G211100 GLYI-9 putative lactoylglutathione lyase AT1G80160:GLYI7:Lactoylglutathione lyase / glyoxalase I family protein 1Chr08:17046316–17048640 (-)1.896e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)7.074e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)4.321e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)4.321e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)7.333e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)7.333e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)7.333e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)7.333e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)5.073e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.372e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)9.186e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.56e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)3.9e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)3.9e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)3.9e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)3.9e-11
Glyma.11G061800 hypothetical protein NA 1Chr11:4632831–4633552 (+)8.041e-11
Glyma.14G072200 Ipk1 AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… 1Chr14:6059598–6063755 (-)3.838e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)9.69e-12
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)5.833e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)8.672e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)6.419e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)9.985e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)5.81e-12
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)1.95e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.226e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.226e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.984e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.72e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.72e-12
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)1.119e-11
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)7.017e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)7.756e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.324e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)2.839e-13