Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P36488

Metabolite ID
P36488
Deionized mass
208.0724 Da
Average m/z
417.1528
Average RT
18.1652
Adduct
[2M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 4Chr16:35831912–35835153 (+)1.612e-13
Glyma.16G196900 hypothetical protein NA 4Chr16:35841279–35846894 (-)1.134e-14
Glyma.06G313500 hypothetical protein NA 3Chr06:50191600–50203098 (-)5.679e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.359e-12
Glyma.19G128200 hypothetical protein NA 2Chr19:38739769–38743404 (+)1.921e-15
Glyma.20G114400 hypothetical protein AT1G68585:AT1G68585:uncharacterized protein 2Chr20:35614355–35616709 (-)2.676e-11
Glyma.01G117000 hypothetical protein NA 1Chr01:40366281–40370122 (+)6.869e-11
Glyma.01G117200 hypothetical protein NA 1Chr01:40497525–40501709 (-)6.869e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)9.604e-13
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)4.395e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)4.097e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)2.765e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.754e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.327e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.565e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)9.149e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)8.225e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)4.008e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)4.008e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.341e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.341e-12
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)2.75e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)3.726e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.626e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)7.132e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)8.917e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)7.132e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)7.132e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)7.621e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.612e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)7.286e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.473e-16
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)9.504e-14
Glyma.16G196400 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 1Chr16:35782198–35790495 (-)3.216e-12
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)3.482e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)3.482e-12
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1134716–1143232 (+)5.378e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)7.795e-18
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)7.795e-18
Glyma.19G128100 hypothetical protein NA 1Chr19:38728037–38732422 (+)8.509e-12
Glyma.19G129500 hypothetical protein AT2G41160:AT2G41160:Ubiquitin-associated (UBA) protein 1Chr19:38884116–38901744 (-)7.696e-14
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.664e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)7.487e-11