Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P36405

Metabolite ID
P36405
Deionized mass
570.2454 Da
Average m/z
571.2517
Average RT
18.1233
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.194e-15
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)9.058e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.312e-13
Glyma.03G027900 hypothetical protein AT2G45270:GCP1:glycoprotease 1 1Chr03:3048805–3061575 (-)3.538e-11
Glyma.03G136000 hypothetical protein NA 1Chr03:35138670–35188160 (-)7.169e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)1.177e-11
Glyma.05G169100 hypothetical protein NA 1Chr05:35959241–35961911 (+)8.795e-12
Glyma.05G191600 hypothetical protein AT2G13680:CALS5:callose synthase 5 1Chr05:37711639–37726572 (-)1.369e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.376e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)5.614e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.511e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.544e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.444e-14
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.008e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.008e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)5.226e-11
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)6.888e-13
Glyma.09G111200 hypothetical protein AT3G12110:ACT11:actin-11 1Chr09:22031217–22034701 (+)7.798e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)3.64e-12
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)3.64e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)4.787e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.541e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.541e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)8.522e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)3.078e-12
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.652e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)4.482e-12
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)1.079e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)5.841e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)1.262e-13
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)3.176e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)1.227e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)1.718e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)6.659e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)1.324e-11
Glyma.18G251400 hypothetical protein NA 1Chr18:53754942–53759244 (-)6.396e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)2.721e-13
Glyma.18G264700 hypothetical protein AT5G15470:GAUT14:galacturonosyltransferase 14__AT3G01040:GAUT13:galacturonosyltransferase 13 1Chr18:54973306–54979374 (-)9.411e-11
Glyma.18G265500 hypothetical protein AT5G39250:AT5G39250:F-box family protein 1Chr18:55019514–55022070 (-)1.771e-11
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)1.012e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)2.638e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.325e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.325e-12
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)3.289e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)1.769e-11