Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P36312

Metabolite ID
P36312
Deionized mass
624.2436 Da
Average m/z
625.2509
Average RT
18.0802
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
64
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

64 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G209300 hypothetical protein NA 2Chr06:20573671–20581076 (-)5.1e-12
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)7.415e-15
Glyma.16G078200 hypothetical protein AT3G21600:AT3G21600:Senescence/dehydration-associated protein-like protein 2Chr16:8060944–8066661 (-)6.347e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.671e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.671e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)8.459e-11
Glyma.03G148900 hypothetical protein NA 1Chr03:36449311–36451278 (+)6.48e-11
Glyma.03G149000 hypothetical protein AT2G48010:RKF3:receptor-like kinase in in flowers 3 1Chr03:36454104–36456822 (+)2.927e-11
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)5.528e-12
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)5.81e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.206e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.573e-11
Glyma.06G207900 hypothetical protein NA 1Chr06:20278974–20282107 (-)2.02e-11
Glyma.06G208000 hypothetical protein AT1G74000:SS3:strictosidine synthase 3 1Chr06:20286288–20288769 (+)2.02e-11
Glyma.06G208900 hypothetical protein NA 1Chr06:20515068–20521900 (-)2.02e-11
Glyma.06G209400 hypothetical protein NA 1Chr06:20622369–20629712 (+)2.02e-11
Glyma.06G209600 hypothetical protein AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:20638577–20641470 (+)2.02e-11
Glyma.06G210000 hypothetical protein NA 1Chr06:20706632–20708144 (-)2.02e-11
Glyma.06G210100 hypothetical protein NA 1Chr06:20725481–20728890 (-)2.02e-11
Glyma.06G210400 hypothetical protein AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit 1Chr06:20768340–20778709 (-)2.02e-11
Glyma.06G210900 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 1Chr06:20942818–20945744 (+)2.02e-11
Glyma.06G211500 hypothetical protein AT5G19950:AT5G19950:tudor domain protein (DUF1767) 1Chr06:21104409–21114116 (-)2.02e-11
Glyma.06G211700 hypothetical protein NA 1Chr06:21226061–21226529 (-)7.085e-11
Glyma.06G211800 hypothetical protein NA 1Chr06:21237649–21239875 (+)7.085e-11
Glyma.06G213600 hypothetical protein NA 1Chr06:21713618–21726865 (+)7.085e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)2.164e-12
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)1.87e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)1.87e-11
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)2.826e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)5.007e-13
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)5.007e-13
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)5.007e-13
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)5.007e-13
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.933e-13
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)4.938e-13
Glyma.10G238300 hypothetical protein AT5G07240:IQD24:IQ-domain 24 1Chr10:46688122–46693051 (-)9.97e-11
Glyma.10G238700 hypothetical protein NA 1Chr10:46721439–46725173 (+)9.97e-11
Glyma.10G239000 hypothetical protein NA 1Chr10:46755702–46757579 (-)9.97e-11
Glyma.11G062400 hypothetical protein AT4G36860:AT4G36860:LIM domain-containing protein 1Chr11:4720040–4726569 (+)4.557e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.785e-12
Glyma.11G109100 hypothetical protein NA 1Chr11:8322727–8324868 (-)6.931e-11
Glyma.11G109900 hypothetical protein AT4G27630:GTG2:GPCR-type G protein 2 1Chr11:8378708–8386493 (-)4.192e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)6.972e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)6.972e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.256e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.005e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.005e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.316e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)5.316e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)5.316e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)1.658e-12
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)2.029e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)3.246e-12
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)1.167e-13
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)3.273e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)6.513e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)9.804e-12
Glyma.16G129000 hypothetical protein AT2G17975:AT2G17975:zinc finger (Ran-binding) family protein 1Chr16:28115778–28119283 (-)8.007e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)1.1e-13
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)1.02e-12
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)4.159e-12
Glyma.18G300500 hypothetical protein NA 1Chr18:57841316–57843280 (+)5.268e-11
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)3.683e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)7.499e-12