Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P35689

Metabolite ID
P35689
Deionized mass
586.1662 Da
Average m/z
587.1748
Average RT
17.8974
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
46
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

46 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)2.596e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.042e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.042e-12
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)5.924e-11
Glyma.16G137600 hypothetical protein NA 2Chr16:29468438–29472890 (-)6.27e-13
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)1.61e-11
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)1.322e-11
Glyma.02G138200 hypothetical protein NA 1Chr02:14307786–14310106 (-)3.921e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)7.25e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.02e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.767e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.208e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.584e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.149e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)5.096e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)7.198e-13
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 1Chr08:11525692–11536927 (+)3.675e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)3.297e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)7.49e-14
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)7.489e-14
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.801e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.8e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.042e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)2.964e-11
Glyma.14G045400 hypothetical protein NA 1Chr14:3463112–3465007 (+)4.236e-11
Glyma.14G045900 hypothetical protein AT1G76490:HMG1:hydroxy methylglutaryl CoA reductase 1 1Chr14:3496600–3500441 (+)3.478e-12
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)1.494e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)2.547e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.863e-12
Glyma.15G139000 hypothetical protein NA 1Chr15:11314329–11317181 (-)1.075e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)3.066e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)3.066e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)5.762e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)5.188e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)4.845e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)5.371e-11
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)2.592e-11
Glyma.16G137000 hypothetical protein NA 1Chr16:29418205–29421765 (-)1.391e-11
Glyma.16G137100 hypothetical protein NA 1Chr16:29421091–29421534 (+)1.391e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.669e-11
Glyma.17G049700 hypothetical protein AT5G35570:AT5G35570:O-fucosyltransferase family protein 1Chr17:3775263–3781370 (+)6.433e-11
Glyma.19G009000 hypothetical protein AT5G14780:FDH:formate dehydrogenase 1Chr19:860974–865476 (+)5.872e-12
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)2.239e-12
Glyma.19G009900 hypothetical protein NA 1Chr19:923053–937826 (-)1.785e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.113e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.113e-13