Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P35423

Metabolite ID
P35423
Deionized mass
451.2379 Da
Average m/z
452.2440
Average RT
17.7923
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
58
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

58 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 3Chr06:15828917–15834067 (+)5.204e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.377e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.377e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.026e-12
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)2.411e-11
Glyma.03G136000 hypothetical protein NA 1Chr03:35138670–35188160 (-)3.37e-11
Glyma.03G152800 hypothetical protein AT4G09820:TT8:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr03:36782245–36790298 (+)1.961e-11
Glyma.03G153200 hypothetical protein NA 1Chr03:36815745–36819041 (-)1.961e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)2.221e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)5.964e-11
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)8.433e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.588e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)1.234e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)1.234e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)1.234e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)1.597e-11
Glyma.06G209300 hypothetical protein NA 1Chr06:20573671–20581076 (-)5.493e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.362e-12
Glyma.08G139300 hypothetical protein AT2G22125:CSI1:binding protein 1Chr08:10653279–10664544 (-)1.608e-13
Glyma.08G149500 hypothetical protein NA 1Chr08:11460264–11465243 (-)8.336e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.029e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.029e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.029e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.029e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.011e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.966e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)2.104e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)6.698e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.862e-13
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)3.775e-13
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)3.775e-13
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)3.775e-13
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)3.775e-13
Glyma.11G105500 hypothetical protein AT2G16640:TOC132:multimeric translocon complex in the outer envelope membrane 132 1Chr11:8015639–8020644 (-)2.301e-11
Glyma.11G105600 hypothetical protein NA 1Chr11:8021436–8024175 (+)8.478e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)4.392e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)2.42e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)2.42e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.355e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.355e-13
Glyma.12G212300 hypothetical protein AT3G58710:WRKY69:WRKY DNA-binding protein 69 1Chr12:37131153–37134096 (+)8.595e-12
Glyma.12G212800 hypothetical protein NA 1Chr12:37179924–37185798 (-)1.155e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.461e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.461e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.377e-13
Glyma.13G197700 hypothetical protein AT5G38730:AT5G38730:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr13:31174654–31180595 (-)8.056e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)7.701e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)7.701e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)6.972e-11
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 1Chr14:6486139–6488935 (+)2.393e-11
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 1Chr14:6498564–6506068 (+)2.393e-11
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 1Chr14:6508609–6520744 (-)2.392e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)3.013e-13
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)6.551e-15
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)2.408e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)7.144e-12
Glyma.18G025700 hypothetical protein AT3G11110:AT3G11110:RING/U-box superfamily protein 1Chr18:1911249–1912730 (+)9.379e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)3.374e-13