Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P35399

Metabolite ID
P35399
Deionized mass
283.0878 Da
Average m/z
284.0961
Average RT
17.7852
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
41
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

41 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)4.776e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)9.041e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)9.539e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)5.637e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)3.12e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.164e-11
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)1.464e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.632e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)6.435e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)7.927e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.982e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.092e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)4.776e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)4.776e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)9.334e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)6.303e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.497e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)8.711e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)9.943e-12
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)4.237e-14
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)4.237e-14
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)6.744e-11
Glyma.11G090300 hypothetical protein AT4G19190:AT4G19190:zinc knuckle (CCHC-type) family protein 1Chr11:6849007–6855564 (+)2.888e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)9.539e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)1.707e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.707e-12
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)5.258e-13
Glyma.15G107500 hypothetical protein NA 1Chr15:8435042–8443925 (+)9.873e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)8.55e-15
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)5.754e-12
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)8.914e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)5.695e-16
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)5.695e-16
Glyma.17G004500 hypothetical protein AT5G47800:AT5G47800:Phototropic-responsive NPH3 family protein 1Chr17:444580–451107 (-)3.331e-12
Glyma.17G005900 hypothetical protein AT4G17215:AT4G17215:Pollen Ole e 1 allergen and extensin family protein__AT2G40113:AT2G40113:Pollen Ole e 1 allergen an… 1Chr17:546212–548525 (+)3.331e-12
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)1.261e-11
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)3.175e-12
Glyma.18G057500 hypothetical protein AT2G30170:PBCP:Protein phosphatase 2C family protein 1Chr18:5080060–5083756 (-)3.201e-13
Glyma.18G057600 hypothetical protein AT1G07020:AT1G07020:uncharacterized protein 1Chr18:5084210–5084791 (+)3.201e-13
Glyma.18G057900 hypothetical protein NA 1Chr18:5092695–5097651 (-)3.201e-13
Glyma.20G179000 hypothetical protein NA 1Chr20:41630613–41632249 (-)1.927e-14