Overview Annotation GWAS Evidence Associated genes

P34980

Metabolite ID
P34980
Deionized mass
1058.4904 Da
Average m/z
1059.5009
Average RT
17.5968
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
19
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

19 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 2Chr10:2485817–2497071 (-)1.093e-13
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)3.494e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)4.613e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)8.73e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.177e-15
Glyma.06G093300 hypothetical protein NA 1Chr06:7344696–7351172 (+)7.662e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.169e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)7.167e-14
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)1.093e-13
Glyma.10G028600 hypothetical protein NA 1Chr10:2487313–2489838 (+)3.54e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)9.501e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)9.501e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)4.985e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.552e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)1.302e-11
Glyma.16G075600 hypothetical protein AT4G19450:AT4G19450:Major facilitator superfamily protein 1Chr16:7617667–7623067 (-)7.649e-11
Glyma.16G219700 hypothetical protein NA 1Chr16:37690133–37695529 (-)7.175e-12
Glyma.18G268900 hypothetical protein AT3G02170:LNG2:longifolia2__AT5G15580:LNG1:longifolia1 1Chr18:55259873–55265930 (-)6.425e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)3.467e-11