Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34871

Metabolite ID
P34871
Deionized mass
634.4044 Da
Average m/z
635.4097
Average RT
17.5615
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
94
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

94 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 4Chr08:11525692–11536927 (+)5.462e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 4Chr16:30652378–30659548 (+)3.422e-13
Glyma.16G196900 hypothetical protein NA 4Chr16:35841279–35846894 (-)8.754e-15
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)8.467e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 3Chr16:35831912–35835153 (+)2.521e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 3Chr20:34984922–34988496 (+)3.981e-15
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 2Chr05:40259388–40262641 (+)5.433e-19
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 2Chr10:48805999–48811533 (-)2.691e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.652e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.652e-13
Glyma.20G109000 hypothetical protein AT4G32640:AT4G32640:Sec23/Sec24 protein transport family protein__AT3G44340:CEF:uncharacterized protein 2Chr20:35134138–35152085 (-)5.227e-11
Glyma.20G112600 hypothetical protein AT5G04310:AT5G04310:Pectin lyase-like superfamily protein 2Chr20:35468911–35474203 (+)6.918e-13
Glyma.01G001300 hypothetical protein AT2G07050:CAS1:cycloartenol synthase 1 1Chr01:227021–237987 (-)9.254e-11
Glyma.01G031900 hypothetical protein AT1G23870:TPS9:trehalose-phosphatase/synthase 9 1Chr01:3342396–3347771 (+)2.64e-12
Glyma.01G032400 hypothetical protein NA 1Chr01:3404831–3411453 (+)2.753e-11
Glyma.03G019700 hypothetical protein AT3G61130:GAUT1:galacturonosyltransferase 1 1Chr03:2010835–2018418 (+)1.576e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.516e-11
Glyma.03G135300 hypothetical protein NA 1Chr03:35092248–35097578 (+)2.502e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)4.426e-11
Glyma.05G222500 hypothetical protein AT2G19600:KEA4:K+ efflux antiporter 4 1Chr05:40179950–40188580 (+)1.15e-11
Glyma.05G222900 hypothetical protein AT4G29490:AT4G29490:Metallopeptidase M24 family protein 1Chr05:40226295–40233649 (-)1.559e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)4.985e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.023e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.728e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)3.378e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.93e-13
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)5.885e-11
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)6.702e-11
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)6.702e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)3.887e-13
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)5.166e-12
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)8.958e-11
Glyma.08G150000 hypothetical protein AT2G32850:AT2G32850:Protein kinase superfamily protein 1Chr08:11518864–11523442 (-)4.31e-12
Glyma.08G199700 hypothetical protein AT5G50340:AT5G50340:DNA repair protein RadA-like protein 1Chr08:16130591–16137703 (+)7.481e-11
Glyma.08G199800 hypothetical protein NA 1Chr08:16137933–16142956 (-)7.481e-11
Glyma.08G199900 hypothetical protein AT3G16480:MPPalpha:mitochondrial processing peptidase alpha subunit 1Chr08:16146033–16151741 (+)7.481e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)8.934e-12
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)4.611e-11
Glyma.10G233200 hypothetical protein NA 1Chr10:46244187–46249491 (-)9.13e-11
Glyma.10G233700 hypothetical protein AT3G49050:AT3G49050:alpha/beta-Hydrolases superfamily protein 1Chr10:46285252–46289700 (-)9.13e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)3.909e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)2.267e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)2.267e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)2.267e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)2.267e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)2.058e-13
Glyma.11G162500 hypothetical protein AT2G40435:AT2G40435:transcription factor SCREAM-like protein 1Chr11:15087390–15090683 (-)3.178e-12
Glyma.11G240600 hypothetical protein NA 1Chr11:33491895–33493311 (+)6.667e-13
Glyma.11G241300 hypothetical protein AT4G39990:RABA4B:RAB GTPase homolog A4B 1Chr11:33552339–33555298 (+)2.506e-13
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)9.959e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)9.959e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)3.854e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)3.854e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)3.541e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)3.541e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.247e-13
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)7.035e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)7.035e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.652e-13
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)2.286e-12
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)3.257e-11
Glyma.15G216700 hypothetical protein NA 1Chr15:35649229–35652466 (-)7.534e-13
Glyma.15G216900 hypothetical protein NA 1Chr15:35680524–35686654 (-)7.534e-13
Glyma.15G217100 hypothetical protein NA 1Chr15:35830853–35832075 (-)7.534e-13
Glyma.15G232600 hypothetical protein NA 1Chr15:43719004–43723574 (+)1.553e-11
Glyma.15G262100 hypothetical protein AT1G79550:PGK:phosphoglycerate kinase 1Chr15:49447943–49451741 (+)4.244e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.964e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.211e-11
Glyma.16G189000 hypothetical protein NA 1Chr16:35160485–35167548 (-)2.988e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.039e-17
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)1.468e-12
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)5.271e-15
Glyma.16G196400 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 1Chr16:35782198–35790495 (-)1.439e-13
Glyma.17G257100 hypothetical protein AT1G75660:XRN3:5'-3' exoribonuclease 3 1Chr17:41113121–41125026 (+)4.609e-12
Glyma.18G091600 hypothetical protein NA 1Chr18:9165090–9166656 (-)7.061e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)7.784e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)2.887e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.161e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.161e-11
Glyma.20G106400 hypothetical protein AT5G23590:AT5G23590:DNAJ heat shock N-terminal domain-containing protein 1Chr20:34888699–34893605 (-)6.046e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)5.713e-12
Glyma.20G107000 hypothetical protein NA 1Chr20:34968161–34968457 (+)1.964e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)1.998e-13
Glyma.20G107600 hypothetical protein NA 1Chr20:35025241–35029762 (+)6.863e-11
Glyma.20G107700 hypothetical protein AT2G16860:AT2G16860:GCIP-interacting family protein 1Chr20:35033414–35036538 (+)5.54e-11
Glyma.20G107900 hypothetical protein NA 1Chr20:35044042–35046452 (-)2.864e-12
Glyma.20G108000 hypothetical protein NA 1Chr20:35047833–35051623 (-)2.596e-12
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)1.224e-11
Glyma.20G109100 hypothetical protein AT1G14590:AT1G14590:Nucleotide-diphospho-sugar transferase family protein 1Chr20:35166747–35171332 (+)5.227e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)9.781e-16
Glyma.20G110000 hypothetical protein AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 1Chr20:35229423–35231861 (+)2.756e-13
Glyma.20G114300 hypothetical protein AT3G25840:AT3G25840:Protein kinase superfamily protein 1Chr20:35602598–35610724 (+)9.905e-11
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)2.252e-11
Glyma.20G129900 hypothetical protein NA 1Chr20:37091399–37092697 (-)1.754e-13