Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34785

Metabolite ID
P34785
Deionized mass
608.3368 Da
Average m/z
609.3435
Average RT
17.5244
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
144
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

144 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.15G103700 hypothetical protein NA 4Chr15:8080974–8087923 (-)3.435e-12
Glyma.14G112200 hypothetical protein AT5G11040:TRS120:TRS120 3Chr14:12914626–12947011 (+)1.767e-11
Glyma.15G103200 hypothetical protein AT3G06180:AT3G06180:Ribosomal protein L34e superfamily protein 3Chr15:8055881–8062129 (-)3.435e-12
Glyma.06G228700 hypothetical protein AT1G78770:APC6:anaphase promoting complex 6 2Chr06:34735799–34746831 (+)5.378e-11
Glyma.06G237900 hypothetical protein NA 2Chr06:38800129–38805358 (-)5.378e-11
Glyma.08G147300 hypothetical protein NA 2Chr08:11238871–11242682 (+)9.397e-18
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 2Chr08:11525692–11536927 (+)9.397e-18
Glyma.12G008000 hypothetical protein AT3G52090:NRPB11:DNA-directed RNA polymerase, RBP11-like protein 2Chr12:592967–596657 (+)1.358e-17
Glyma.12G009300 hypothetical protein AT5G13710:SMT1:sterol methyltransferase 1 2Chr12:675878–679976 (+)1.358e-17
Glyma.12G009400 hypothetical protein AT3G59980:AT3G59980:Nucleic acid-binding, OB-fold-like protein 2Chr12:682744–686707 (-)1.358e-17
Glyma.12G023300 hypothetical protein NA 2Chr12:1711347–1715917 (+)1.358e-17
Glyma.12G025600 hypothetical protein AT5G23210:SCPL34:serine carboxypeptidase-like 34 2Chr12:1844961–1853018 (-)1.358e-17
Glyma.13G032400 hypothetical protein AT1G21640:NADK2:NAD kinase 2 2Chr13:10365449–10376174 (-)2.787e-12
Glyma.13G036400 hypothetical protein AT1G76990:ACR3:ACT domain repeat 3 2Chr13:11425413–11437146 (+)2.787e-12
Glyma.13G040600 hypothetical protein AT5G53310:AT5G53310:myosin heavy chain-like protein 2Chr13:12931343–12943367 (+)2.787e-12
Glyma.14G113900 hypothetical protein AT4G32120:AT4G32120:Galactosyltransferase family protein__AT2G25300:AT2G25300:Galactosyltransferase family protein 2Chr14:13541560–13548445 (-)1.767e-11
Glyma.14G168900 hypothetical protein NA 2Chr14:41810887–41824473 (+)5.646e-11
Glyma.14G172600 hypothetical protein AT1G34580:AT1G34580:Major facilitator superfamily protein 2Chr14:42702411–42715516 (+)9.397e-18
Glyma.14G173000 hypothetical protein NA 2Chr14:42769792–42780190 (-)9.397e-18
Glyma.15G103000 hypothetical protein NA 2Chr15:8048990–8049723 (+)3.435e-12
Glyma.15G271000 hypothetical protein NA 2Chr15:50823428–50827189 (+)9.397e-18
Glyma.17G137300 hypothetical protein AT1G62790:AT1G62790:Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 2Chr17:11083176–11085418 (-)3.327e-15
Glyma.17G138000 hypothetical protein NA 2Chr17:11133558–11136539 (-)7.416e-11
Glyma.20G135900 hypothetical protein AT1G23780:AT1G23780:F-box family protein 2Chr20:37557214–37567807 (+)7.396e-13
Glyma.20G138800 hypothetical protein NA 2Chr20:37811695–37815670 (-)7.396e-13
Glyma.02G097300 hypothetical protein AT1G10840:TIF3H1:translation initiation factor 3 subunit H1 1Chr02:8740317–8744368 (+)1.358e-17
Glyma.02G097400 hypothetical protein AT3G28040:AT3G28040:Leucine-rich receptor-like protein kinase family protein 1Chr02:8742027–8748911 (-)1.358e-17
Glyma.03G040400 hypothetical protein NA 1Chr03:5050463–5052307 (+)3.073e-11
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)3.073e-11
Glyma.05G180500 hypothetical protein AT1G22170:AT1G22170:Phosphoglycerate mutase family protein 1Chr05:36850477–36856377 (-)9.397e-18
Glyma.06G173500 hypothetical protein AT2G36850:GSL8:glucan synthase-like 8 1Chr06:14595971–14646811 (+)1.633e-18
Glyma.06G173800 hypothetical protein AT3G48430:REF6:relative of early flowering 6 1Chr06:14676662–14687185 (+)1.633e-18
Glyma.06G223900 hypothetical protein AT2G18730:DGK3:diacylglycerol kinase 3 1Chr06:29792532–29817703 (-)5.378e-11
Glyma.06G225100 hypothetical protein AT4G30710:QWRF8:QWRF motif protein (DUF566) 1Chr06:30788958–30800763 (+)5.378e-11
Glyma.06G225600 hypothetical protein NA 1Chr06:31131372–31133932 (-)5.378e-11
Glyma.06G228500 hypothetical protein NA 1Chr06:34727470–34731606 (+)5.378e-11
Glyma.06G230300 Ubiquitin-conjugating enzyme 36 AT1G16890:UBC36:ubiquitin-conjugating enzyme 36 1Chr06:35837790–35843235 (+)5.378e-11
Glyma.06G231700 hypothetical protein NA 1Chr06:36314012–36315178 (+)5.378e-11
Glyma.06G236100 hypothetical protein AT3G15180:AT3G15180:ARM repeat superfamily protein 1Chr06:38406236–38420064 (+)5.378e-11
Glyma.06G236400 hypothetical protein NA 1Chr06:38472142–38473297 (+)5.378e-11
Glyma.06G237200 hypothetical protein NA 1Chr06:38664259–38665918 (+)5.378e-11
Glyma.06G237800 hypothetical protein NA 1Chr06:38795728–38799907 (+)5.378e-11
Glyma.08G147500 hypothetical protein AT3G18680:AT3G18680:Amino acid kinase family protein 1Chr08:11253074–11256505 (+)9.397e-18
Glyma.08G150000 hypothetical protein AT2G32850:AT2G32850:Protein kinase superfamily protein 1Chr08:11518864–11523442 (-)9.397e-18
Glyma.08G150400 hypothetical protein NA 1Chr08:11565265–11571675 (+)9.397e-18
Glyma.10G020600 hypothetical protein AT2G47850:AT2G47850:Zinc finger C-x8-C-x5-C-x3-H type family protein 1Chr10:1782653–1786135 (+)3.638e-12
Glyma.10G021400 hypothetical protein NA 1Chr10:1857313–1860298 (+)3.638e-12
Glyma.10G021900 hypothetical protein AT4G03120:AT4G03120:C2H2 and C2HC zinc fingers superfamily protein 1Chr10:1913824–1918535 (-)3.638e-12
Glyma.10G022000 hypothetical protein AT3G20740:FIE:Transducin/WD40 repeat-like superfamily protein 1Chr10:1919552–1926140 (-)3.638e-12
Glyma.10G022200 hypothetical protein AT4G03110:RBP-DR1:RNA-binding protein-defense related 1 1Chr10:1930320–1935651 (+)3.638e-12
Glyma.11G059100 hypothetical protein NA 1Chr11:4467115–4468805 (-)9.397e-18
Glyma.11G093900 hypothetical protein AT1G51500:ABCG12:ABC-2 type transporter family protein 1Chr11:7130214–7137304 (-)2.285e-11
Glyma.12G019500 hypothetical protein AT1G51405:AT1G51405:myosin-like protein 1Chr12:1373656–1376966 (+)1.358e-17
Glyma.12G020400 hypothetical protein AT1G51500:ABCG12:ABC-2 type transporter family protein 1Chr12:1445666–1452363 (-)1.804e-13
Glyma.12G021200 hypothetical protein NA 1Chr12:1524303–1527258 (+)1.358e-17
Glyma.12G021500 hypothetical protein AT1G50450:AT1G50450:Saccharopine dehydrogenase 1Chr12:1547281–1552018 (-)1.358e-17
Glyma.12G023500 hypothetical protein AT4G38810:AT4G38810:Calcium-binding EF-hand family protein 1Chr12:1729351–1733595 (+)1.358e-17
Glyma.12G026400 hypothetical protein AT5G23140:NCLPP7:nuclear-encoded CLP protease P7 1Chr12:1903630–1905558 (+)1.358e-17
Glyma.13G031500 hypothetical protein AT1G44110:CYCA1;1:Cyclin A1;1 1Chr13:10229246–10234028 (+)2.787e-12
Glyma.13G031600 hypothetical protein NA 1Chr13:10243883–10250791 (+)2.787e-12
Glyma.13G031700 hypothetical protein NA 1Chr13:10255501–10258532 (-)2.787e-12
Glyma.13G032100 hypothetical protein NA 1Chr13:10313707–10316175 (-)2.787e-12
Glyma.13G032300 hypothetical protein AT4G19610:AT4G19610:nucleotide/nucleic acid binding protein__AT5G08695:AT5G08695:RNA-binding (RRM/RBD/RNP motifs) famil… 1Chr13:10349300–10360514 (-)2.787e-12
Glyma.13G032500 hypothetical protein AT1G21610:AT1G21610:wound-responsive family protein 1Chr13:10379385–10393174 (-)2.787e-12
Glyma.13G033600 hypothetical protein NA 1Chr13:10575983–10578863 (+)2.787e-12
Glyma.13G033700 hypothetical protein NA 1Chr13:10577767–10578778 (+)2.787e-12
Glyma.13G034000 hypothetical protein NA 1Chr13:10656555–10657331 (-)2.787e-12
Glyma.13G034100 hypothetical protein AT5G20240:PI:K-box region and MADS-box transcription factor family protein 1Chr13:10667998–10673471 (+)2.787e-12
Glyma.13G034600 hypothetical protein NA 1Chr13:10786137–10795390 (+)2.787e-12
Glyma.13G035200 hypothetical protein AT1G77120:ADH1:alcohol dehydrogenase 1 1Chr13:10928700–10935155 (+)2.787e-12
Glyma.13G035400 hypothetical protein NA 1Chr13:10967688–10986565 (+)2.787e-12
Glyma.13G035500 hypothetical protein AT1G77230:AT1G77230:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr13:10987744–10996313 (-)2.787e-12
Glyma.13G035700 hypothetical protein NA 1Chr13:11104751–11109149 (-)2.787e-12
Glyma.13G035800 hypothetical protein NA 1Chr13:11163860–11169153 (+)2.787e-12
Glyma.13G036200 hypothetical protein NA 1Chr13:11338195–11340331 (-)2.787e-12
Glyma.13G036300 hypothetical protein NA 1Chr13:11406312–11416269 (+)2.787e-12
Glyma.13G036800 hypothetical protein AT1G43890:RAB18:RAB GTPASE HOMOLOG B18 1Chr13:11490072–11497385 (-)2.787e-12
Glyma.13G036900 hypothetical protein NA 1Chr13:11534440–11535219 (+)2.787e-12
Glyma.13G037300 hypothetical protein AT5G25800:AT5G25800:Polynucleotidyl transferase, ribonuclease H-like superfamily protein 1Chr13:11627463–11638646 (-)2.787e-12
Glyma.13G037400 hypothetical protein NA 1Chr13:11674345–11678672 (+)2.787e-12
Glyma.13G037600 hypothetical protein AT1G43850:SEU:SEUSS transcriptional co-regulator 1Chr13:11706789–11719329 (-)2.787e-12
Glyma.13G037700 hypothetical protein NA 1Chr13:11709400–11713858 (+)2.787e-12
Glyma.13G038200 hypothetical protein NA 1Chr13:11815808–11818199 (+)2.787e-12
Glyma.13G038600 SACPD stearoyl-acyl carrier protein desaturase AT1G43800:FTM1:Plant stearoyl-acyl-carrier-protein desaturase family protein 1Chr13:11956631–11959361 (-)2.787e-12
Glyma.13G039500 hypothetical protein NA 1Chr13:12229285–12231327 (-)2.787e-12
Glyma.13G040100 hypothetical protein AT5G53210:SPCH:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr13:12532178–12536107 (+)2.787e-12
Glyma.13G040400 hypothetical protein NA 1Chr13:12875981–12877773 (+)2.787e-12
Glyma.13G040700 hypothetical protein NA 1Chr13:12944725–12945256 (+)2.787e-12
Glyma.13G041100 hypothetical protein NA 1Chr13:13133244–13137306 (+)2.787e-12
Glyma.13G041200 hypothetical protein AT5G24120:SIGE:sigma factor E 1Chr13:13162176–13168574 (+)2.787e-12
Glyma.13G041500 hypothetical protein AT5G53180:PTB2:polypyrimidine tract-binding protein 2 1Chr13:13324872–13331513 (+)2.787e-12
Glyma.13G041700 hypothetical protein AT5G53170:FTSH11:FTSH protease 11 1Chr13:13342215–13357011 (+)2.787e-12
Glyma.13G042100 hypothetical protein AT5G53140:AT5G53140:Protein phosphatase 2C family protein 1Chr13:13516047–13530998 (-)2.787e-12
Glyma.13G042400 hypothetical protein NA 1Chr13:13558124–13561241 (+)2.787e-12
Glyma.13G042600 hypothetical protein AT5G64300:GCH:GTP cyclohydrolase II 1Chr13:13569710–13577998 (-)2.787e-12
Glyma.13G042700 hypothetical protein NA 1Chr13:13579883–13588272 (-)2.787e-12
Glyma.13G043700 hypothetical protein NA 1Chr13:13702272–13712017 (+)2.787e-12
Glyma.13G054700 hypothetical protein NA 1Chr13:15208076–15209264 (+)6.424e-14
Glyma.13G054800 hypothetical protein NA 1Chr13:15215629–15217477 (+)8.06e-20
Glyma.13G055200 hypothetical protein AT3G02200:AT3G02200:Proteasome component (PCI) domain protein 1Chr13:15229290–15234025 (-)8.06e-20
Glyma.13G206500 hypothetical protein AT4G04880:AT4G04880:adenosine/AMP deaminase family protein 1Chr13:32017472–32022810 (-)1.144e-11
Glyma.14G065000 hypothetical protein AT2G39830:DAR2:DA1-related protein 2 1Chr14:5335292–5340659 (-)8.469e-12
Glyma.14G109400 hypothetical protein NA 1Chr14:12195915–12197701 (+)9.397e-18
Glyma.14G109700 hypothetical protein NA 1Chr14:12304024–12321324 (-)9.397e-18
Glyma.14G109800 hypothetical protein NA 1Chr14:12308033–12311820 (+)9.397e-18
Glyma.14G110700 hypothetical protein NA 1Chr14:12508457–12517701 (-)9.397e-18
Glyma.14G111100 hypothetical protein NA 1Chr14:12580488–12588442 (-)9.397e-18
Glyma.14G112000 hypothetical protein NA 1Chr14:12878930–12881494 (-)1.767e-11
Glyma.14G112700 hypothetical protein NA 1Chr14:13186359–13206390 (-)1.767e-11
Glyma.14G113500 hypothetical protein NA 1Chr14:13369412–13371873 (+)1.767e-11
Glyma.14G113700 hypothetical protein NA 1Chr14:13402676–13403092 (-)1.767e-11
Glyma.14G114000 hypothetical protein AT4G32140:AT4G32140:EamA-like transporter family 1Chr14:13553236–13558158 (-)1.767e-11
Glyma.14G120900 PIN6b AT1G77110:PIN6:Auxin efflux carrier family protein 1Chr14:17400748–17415357 (+)9.397e-18
Glyma.14G127600 hypothetical protein AT2G25610:AT2G25610:ATPase, F0/V0 complex, subunit C protein 1Chr14:20431306–20434195 (-)1.641e-12
Glyma.14G169100 hypothetical protein NA 1Chr14:41887221–41887842 (+)5.646e-11
Glyma.14G169200 hypothetical protein AT1G22140:AT1G22140:zinc finger CCCH domain protein 1Chr14:41885186–41890264 (-)5.646e-11
Glyma.14G172700 hypothetical protein AT1G34580:AT1G34580:Major facilitator superfamily protein 1Chr14:42719372–42727823 (+)9.397e-18
Glyma.15G097300 hypothetical protein AT5G18650:AT5G18650:CHY-type/CTCHY-type/RING-type Zinc finger protein 1Chr15:7560205–7564106 (+)3.546e-12
Glyma.15G097500 hypothetical protein NA 1Chr15:7571828–7575348 (-)3.546e-12
Glyma.15G098200 hypothetical protein AT5G18680:TLP11:tubby like protein 11 1Chr15:7632350–7637574 (-)3.546e-12
Glyma.15G099100 hypothetical protein AT3G06330:AT3G06330:RING/U-box superfamily protein 1Chr15:7710497–7715798 (-)3.546e-12
Glyma.15G099500 hypothetical protein NA 1Chr15:7747286–7752481 (+)3.546e-12
Glyma.15G099600 hypothetical protein AT5G18840:AT5G18840:Major facilitator superfamily protein 1Chr15:7754389–7757430 (+)3.546e-12
Glyma.15G102600 hypothetical protein AT2G39590:AT2G39590:40S ribosomal protein S15a 1Chr15:8018666–8022093 (-)3.435e-12
Glyma.15G103300 hypothetical protein AT3G06170:AT3G06170:Serinc-domain containing serine and sphingolipid biosynthesis protein 1Chr15:8066381–8070490 (-)1.358e-17
Glyma.15G103500 hypothetical protein NA 1Chr15:8077952–8078542 (+)3.435e-12
Glyma.15G104300 hypothetical protein AT3G06140:LUL4:RING/U-box superfamily protein 1Chr15:8155486–8159701 (+)3.435e-12
Glyma.15G104400 hypothetical protein AT3G06130:AT3G06130:Heavy metal transport/detoxification superfamily protein 1Chr15:8171016–8173656 (+)3.435e-12
Glyma.16G059500 hypothetical protein AT3G01810:AT3G01810:EEIG1/EHBP1 protein amino-terminal domain protein 1Chr16:5808140–5814943 (-)1.794e-12
Glyma.17G062700 hypothetical protein AT3G02920:RPA32B:Replication protein A, subunit RPA32 1Chr17:4829089–4834095 (-)1.358e-17
Glyma.17G137200 hypothetical protein AT1G12500:AT1G12500:Nucleotide-sugar transporter family protein 1Chr17:11073919–11077576 (-)3.327e-15
Glyma.17G137500 hypothetical protein NA 1Chr17:11097469–11100931 (-)3.327e-15
Glyma.19G125600 hypothetical protein AT1G65440:GTB1:global transcription factor group B1 1Chr19:38382184–38391933 (-)1.358e-17
Glyma.19G125800 hypothetical protein AT2G40840:DPE2:disproportionating enzyme 2 1Chr19:38410642–38423531 (+)1.358e-17
Glyma.19G126500 hypothetical protein AT2G40930:UBP5:ubiquitin-specific protease 5 1Chr19:38503103–38515850 (-)1.358e-17
Glyma.19G126600 hypothetical protein NA 1Chr19:38519657–38524877 (-)1.358e-17
Glyma.20G136400 hypothetical protein NA 1Chr20:37606446–37607165 (-)7.396e-13
Glyma.20G137700 CRK69 cysteine-rich receptor-like protein kinase NA 1Chr20:37718908–37728897 (-)7.396e-13
Glyma.20G137800 hypothetical protein NA 1Chr20:37733444–37734150 (+)7.396e-13
Glyma.20G139000 hypothetical protein NA 1Chr20:37828387–37833226 (-)7.396e-13
Glyma.20G139100 hypothetical protein NA 1Chr20:37838389–37841836 (-)7.396e-13
Glyma.20G186800 hypothetical protein NA 1Chr20:42539420–42546316 (-)9.397e-18
Glyma.20G188400 hypothetical protein NA 1Chr20:42705536–42708684 (-)9.397e-18
Glyma.20G237600 hypothetical protein NA 1Chr20:46943062–46944735 (+)1.171e-11