Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34763

Metabolite ID
P34763
Deionized mass
558.3372 Da
Average m/z
559.3434
Average RT
17.5176
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
76
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

76 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.15G103700 hypothetical protein NA 4Chr15:8080974–8087923 (-)1.335e-11
Glyma.15G103200 hypothetical protein AT3G06180:AT3G06180:Ribosomal protein L34e superfamily protein 3Chr15:8055881–8062129 (-)1.335e-11
Glyma.09G180300 hypothetical protein AT1G73760:AT1G73760:RING/U-box superfamily protein 2Chr09:40535877–40541369 (-)4.9e-16
Glyma.12G008000 hypothetical protein AT3G52090:NRPB11:DNA-directed RNA polymerase, RBP11-like protein 2Chr12:592967–596657 (+)8.954e-17
Glyma.12G009300 hypothetical protein AT5G13710:SMT1:sterol methyltransferase 1 2Chr12:675878–679976 (+)8.954e-17
Glyma.12G009400 hypothetical protein AT3G59980:AT3G59980:Nucleic acid-binding, OB-fold-like protein 2Chr12:682744–686707 (-)8.954e-17
Glyma.12G023300 hypothetical protein NA 2Chr12:1711347–1715917 (+)8.954e-17
Glyma.12G025600 hypothetical protein AT5G23210:SCPL34:serine carboxypeptidase-like 34 2Chr12:1844961–1853018 (-)8.954e-17
Glyma.13G032400 hypothetical protein AT1G21640:NADK2:NAD kinase 2 2Chr13:10365449–10376174 (-)8.512e-11
Glyma.13G036400 hypothetical protein AT1G76990:ACR3:ACT domain repeat 3 2Chr13:11425413–11437146 (+)8.512e-11
Glyma.13G040600 hypothetical protein AT5G53310:AT5G53310:myosin heavy chain-like protein 2Chr13:12931343–12943367 (+)8.512e-11
Glyma.15G103000 hypothetical protein NA 2Chr15:8048990–8049723 (+)1.335e-11
Glyma.02G097300 hypothetical protein AT1G10840:TIF3H1:translation initiation factor 3 subunit H1 1Chr02:8740317–8744368 (+)8.954e-17
Glyma.02G097400 hypothetical protein AT3G28040:AT3G28040:Leucine-rich receptor-like protein kinase family protein 1Chr02:8742027–8748911 (-)8.954e-17
Glyma.09G178500 hypothetical protein AT1G73690:CDKD1;1:cyclin-dependent kinase D1;1 1Chr09:40336748–40341928 (+)1.767e-14
Glyma.10G020600 hypothetical protein AT2G47850:AT2G47850:Zinc finger C-x8-C-x5-C-x3-H type family protein 1Chr10:1782653–1786135 (+)2.327e-12
Glyma.10G021400 hypothetical protein NA 1Chr10:1857313–1860298 (+)2.327e-12
Glyma.10G021900 hypothetical protein AT4G03120:AT4G03120:C2H2 and C2HC zinc fingers superfamily protein 1Chr10:1913824–1918535 (-)2.327e-12
Glyma.10G022000 hypothetical protein AT3G20740:FIE:Transducin/WD40 repeat-like superfamily protein 1Chr10:1919552–1926140 (-)2.327e-12
Glyma.10G022200 hypothetical protein AT4G03110:RBP-DR1:RNA-binding protein-defense related 1 1Chr10:1930320–1935651 (+)2.327e-12
Glyma.12G019500 hypothetical protein AT1G51405:AT1G51405:myosin-like protein 1Chr12:1373656–1376966 (+)8.954e-17
Glyma.12G020400 hypothetical protein AT1G51500:ABCG12:ABC-2 type transporter family protein 1Chr12:1445666–1452363 (-)1.825e-14
Glyma.12G021200 hypothetical protein NA 1Chr12:1524303–1527258 (+)8.954e-17
Glyma.12G021500 hypothetical protein AT1G50450:AT1G50450:Saccharopine dehydrogenase 1Chr12:1547281–1552018 (-)8.954e-17
Glyma.12G023500 hypothetical protein AT4G38810:AT4G38810:Calcium-binding EF-hand family protein 1Chr12:1729351–1733595 (+)8.954e-17
Glyma.12G026400 hypothetical protein AT5G23140:NCLPP7:nuclear-encoded CLP protease P7 1Chr12:1903630–1905558 (+)8.954e-17
Glyma.13G031500 hypothetical protein AT1G44110:CYCA1;1:Cyclin A1;1 1Chr13:10229246–10234028 (+)8.512e-11
Glyma.13G031600 hypothetical protein NA 1Chr13:10243883–10250791 (+)8.512e-11
Glyma.13G031700 hypothetical protein NA 1Chr13:10255501–10258532 (-)8.512e-11
Glyma.13G032100 hypothetical protein NA 1Chr13:10313707–10316175 (-)8.512e-11
Glyma.13G032300 hypothetical protein AT4G19610:AT4G19610:nucleotide/nucleic acid binding protein__AT5G08695:AT5G08695:RNA-binding (RRM/RBD/RNP motifs) famil… 1Chr13:10349300–10360514 (-)8.512e-11
Glyma.13G032500 hypothetical protein AT1G21610:AT1G21610:wound-responsive family protein 1Chr13:10379385–10393174 (-)8.512e-11
Glyma.13G033600 hypothetical protein NA 1Chr13:10575983–10578863 (+)8.512e-11
Glyma.13G033700 hypothetical protein NA 1Chr13:10577767–10578778 (+)8.512e-11
Glyma.13G034000 hypothetical protein NA 1Chr13:10656555–10657331 (-)8.512e-11
Glyma.13G034100 hypothetical protein AT5G20240:PI:K-box region and MADS-box transcription factor family protein 1Chr13:10667998–10673471 (+)8.512e-11
Glyma.13G034600 hypothetical protein NA 1Chr13:10786137–10795390 (+)8.512e-11
Glyma.13G035200 hypothetical protein AT1G77120:ADH1:alcohol dehydrogenase 1 1Chr13:10928700–10935155 (+)8.512e-11
Glyma.13G035400 hypothetical protein NA 1Chr13:10967688–10986565 (+)8.512e-11
Glyma.13G035500 hypothetical protein AT1G77230:AT1G77230:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr13:10987744–10996313 (-)8.512e-11
Glyma.13G035700 hypothetical protein NA 1Chr13:11104751–11109149 (-)8.512e-11
Glyma.13G035800 hypothetical protein NA 1Chr13:11163860–11169153 (+)8.512e-11
Glyma.13G036200 hypothetical protein NA 1Chr13:11338195–11340331 (-)8.512e-11
Glyma.13G036300 hypothetical protein NA 1Chr13:11406312–11416269 (+)8.512e-11
Glyma.13G036800 hypothetical protein AT1G43890:RAB18:RAB GTPASE HOMOLOG B18 1Chr13:11490072–11497385 (-)8.512e-11
Glyma.13G036900 hypothetical protein NA 1Chr13:11534440–11535219 (+)8.512e-11
Glyma.13G037300 hypothetical protein AT5G25800:AT5G25800:Polynucleotidyl transferase, ribonuclease H-like superfamily protein 1Chr13:11627463–11638646 (-)8.512e-11
Glyma.13G037400 hypothetical protein NA 1Chr13:11674345–11678672 (+)8.512e-11
Glyma.13G037600 hypothetical protein AT1G43850:SEU:SEUSS transcriptional co-regulator 1Chr13:11706789–11719329 (-)8.512e-11
Glyma.13G037700 hypothetical protein NA 1Chr13:11709400–11713858 (+)8.512e-11
Glyma.13G038200 hypothetical protein NA 1Chr13:11815808–11818199 (+)8.512e-11
Glyma.13G038600 SACPD stearoyl-acyl carrier protein desaturase AT1G43800:FTM1:Plant stearoyl-acyl-carrier-protein desaturase family protein 1Chr13:11956631–11959361 (-)8.512e-11
Glyma.13G039500 hypothetical protein NA 1Chr13:12229285–12231327 (-)8.512e-11
Glyma.13G040100 hypothetical protein AT5G53210:SPCH:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr13:12532178–12536107 (+)8.512e-11
Glyma.13G040400 hypothetical protein NA 1Chr13:12875981–12877773 (+)8.512e-11
Glyma.13G040700 hypothetical protein NA 1Chr13:12944725–12945256 (+)8.512e-11
Glyma.13G041100 hypothetical protein NA 1Chr13:13133244–13137306 (+)8.512e-11
Glyma.13G041200 hypothetical protein AT5G24120:SIGE:sigma factor E 1Chr13:13162176–13168574 (+)8.512e-11
Glyma.13G041500 hypothetical protein AT5G53180:PTB2:polypyrimidine tract-binding protein 2 1Chr13:13324872–13331513 (+)8.512e-11
Glyma.13G041700 hypothetical protein AT5G53170:FTSH11:FTSH protease 11 1Chr13:13342215–13357011 (+)8.512e-11
Glyma.13G042100 hypothetical protein AT5G53140:AT5G53140:Protein phosphatase 2C family protein 1Chr13:13516047–13530998 (-)8.512e-11
Glyma.13G042400 hypothetical protein NA 1Chr13:13558124–13561241 (+)8.512e-11
Glyma.13G042600 hypothetical protein AT5G64300:GCH:GTP cyclohydrolase II 1Chr13:13569710–13577998 (-)8.512e-11
Glyma.13G042700 hypothetical protein NA 1Chr13:13579883–13588272 (-)8.512e-11
Glyma.13G043700 hypothetical protein NA 1Chr13:13702272–13712017 (+)8.512e-11
Glyma.13G206500 hypothetical protein AT4G04880:AT4G04880:adenosine/AMP deaminase family protein 1Chr13:32017472–32022810 (-)2.025e-11
Glyma.15G102600 hypothetical protein AT2G39590:AT2G39590:40S ribosomal protein S15a 1Chr15:8018666–8022093 (-)1.335e-11
Glyma.15G103300 hypothetical protein AT3G06170:AT3G06170:Serinc-domain containing serine and sphingolipid biosynthesis protein 1Chr15:8066381–8070490 (-)8.954e-17
Glyma.15G103500 hypothetical protein NA 1Chr15:8077952–8078542 (+)1.335e-11
Glyma.15G104300 hypothetical protein AT3G06140:LUL4:RING/U-box superfamily protein 1Chr15:8155486–8159701 (+)1.335e-11
Glyma.15G104400 hypothetical protein AT3G06130:AT3G06130:Heavy metal transport/detoxification superfamily protein 1Chr15:8171016–8173656 (+)1.335e-11
Glyma.17G062700 hypothetical protein AT3G02920:RPA32B:Replication protein A, subunit RPA32 1Chr17:4829089–4834095 (-)8.954e-17
Glyma.19G125600 hypothetical protein AT1G65440:GTB1:global transcription factor group B1 1Chr19:38382184–38391933 (-)8.954e-17
Glyma.19G125800 hypothetical protein AT2G40840:DPE2:disproportionating enzyme 2 1Chr19:38410642–38423531 (+)8.954e-17
Glyma.19G126500 hypothetical protein AT2G40930:UBP5:ubiquitin-specific protease 5 1Chr19:38503103–38515850 (-)8.954e-17
Glyma.19G126600 hypothetical protein NA 1Chr19:38519657–38524877 (-)8.954e-17