Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34662

Metabolite ID
P34662
Deionized mass
858.3896 Da
Average m/z
859.3932
Average RT
17.4856
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
59
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

59 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 4Chr16:30652378–30659548 (+)6.006e-12
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.785e-13
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 2Chr02:39040135–39043181 (-)8.715e-14
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)2.942e-12
Glyma.07G074800 hypothetical protein AT3G16840:AT3G16840:P-loop containing nucleoside triphosphate hydrolases superfamily protein 2Chr07:6806841–6815545 (-)5.842e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)8.299e-12
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)8.982e-12
Glyma.01G016500 hypothetical protein AT4G25960:ABCB2:P-glycoprotein 2 1Chr01:1573790–1583422 (+)3.029e-11
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)6.567e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)7.06e-15
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)2.168e-11
Glyma.02G205500 hypothetical protein AT5G57870:eIFiso4G1:MIF4G domain-containing protein / MA3 domain-containing protein 1Chr02:39045905–39052694 (-)7.669e-11
Glyma.03G020400 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2 1Chr03:2078755–2084370 (+)7.604e-11
Glyma.03G055900 hypothetical protein AT2G38280:FAC1:AMP deaminase, putative / myoadenylate deaminase 1Chr03:7693451–7703679 (+)3.453e-11
Glyma.03G119400 hypothetical protein AT5G43280:DCI1:delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 1Chr03:33050663–33053094 (+)3.204e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)5.839e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)7.557e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)8.819e-13
Glyma.06G293600 hypothetical protein AT1G03650:AT1G03650:Acyl-CoA N-acyltransferases (NAT) superfamily protein 1Chr06:48251255–48252791 (+)3.645e-11
Glyma.06G293700 hypothetical protein AT2G20740:AT2G20740:Tetraspanin family protein 1Chr06:48253149–48265560 (+)2.131e-14
Glyma.06G305100 hypothetical protein NA 1Chr06:49413291–49417661 (-)1.76e-11
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)6.304e-14
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.785e-13
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.785e-13
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)4.456e-11
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)1.652e-11
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)1.652e-11
Glyma.07G075400 hypothetical protein NA 1Chr07:6849233–6853058 (+)5.839e-11
Glyma.07G075500 hypothetical protein AT3G61200:AT3G61200:Thioesterase superfamily protein 1Chr07:6854865–6858091 (+)5.839e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)8.072e-13
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)8.435e-12
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 1Chr08:8868075–8876513 (+)5.993e-11
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)4.502e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.785e-11
Glyma.10G082100 hypothetical protein AT3G05680:EMB2016:embryo defective 2016 1Chr10:9934486–9960586 (-)1.263e-11
Glyma.10G082200 hypothetical protein NA 1Chr10:9967027–9970045 (-)3.123e-12
Glyma.11G070700 hypothetical protein NA 1Chr11:5282926–5287258 (+)4.213e-11
Glyma.11G117500 hypothetical protein NA 1Chr11:8932743–8933846 (-)9.527e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)7.463e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)7.887e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)8.93e-12
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)8.276e-13
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)4.679e-13
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)1.067e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)4.983e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)6.006e-12
Glyma.16G145300 hypothetical protein AT2G35780:scpl26:serine carboxypeptidase-like 26__AT3G07990:SCPL27:serine carboxypeptidase-like 27 1Chr16:30604586–30608656 (+)3.753e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)9.398e-12
Glyma.18G044100 hypothetical protein NA 1Chr18:3809348–3812858 (-)3.236e-12
Glyma.18G044200 hypothetical protein AT5G17300:RVE1:Homeodomain-like superfamily protein 1Chr18:3813589–3817289 (-)3.236e-12
Glyma.18G251000 hypothetical protein NA 1Chr18:53738009–53740714 (+)4.294e-11
Glyma.18G251400 hypothetical protein NA 1Chr18:53754942–53759244 (-)7.912e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)8.299e-12
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1134716–1143232 (+)8.982e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.224e-18
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.224e-18
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)7.779e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)5.492e-12
Glyma.20G105500 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein__AT5G05320:AT5G05320:FAD/NAD(P)-binding oxidoreduc… 1Chr20:34813357–34815998 (-)1.394e-12