Overview Annotation GWAS Evidence Associated genes

P34646

Metabolite ID
P34646
Deionized mass
585.3455 Da
Average m/z
586.3518
Average RT
17.4818
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)3.532e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)4.636e-11
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)4.873e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)8.119e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.624e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.146e-13
Glyma.08G140900 hypothetical protein AT5G64940:ATH13:ABC2 homolog 13 1Chr08:10760962–10769630 (-)3.248e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)4.788e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)1.378e-12
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)5.428e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)5.806e-13
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)4.746e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)4.746e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.036e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)6.479e-11