Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34636

Metabolite ID
P34636
Deionized mass
369.2499 Da
Average m/z
370.2559
Average RT
17.4789
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
64
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

64 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G172900 hypothetical protein NA 3Chr01:51020276–51025649 (-)2.205e-11
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)7.361e-11
Glyma.01G171900 hypothetical protein AT5G66460:MAN7:Glycosyl hydrolase superfamily protein 2Chr01:50912520–50915454 (-)2.205e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2Chr08:9435391–9437279 (+)3.149e-13
Glyma.08G122500 hypothetical protein NA 2Chr08:9441329–9445315 (-)1.898e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.898e-12
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)6.877e-12
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)6.876e-12
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)6.876e-12
Glyma.10G272800 hypothetical protein AT1G25350:OVA9:glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS 2Chr10:49530856–49539222 (+)5.347e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)6.453e-13
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)7.191e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)1.607e-12
Glyma.20G112600 hypothetical protein AT5G04310:AT5G04310:Pectin lyase-like superfamily protein 2Chr20:35468911–35474203 (+)6.122e-13
Glyma.01G172500 hypothetical protein NA 1Chr01:50960881–50965173 (-)6.093e-11
Glyma.01G172600 IFR1 NA 1Chr01:50980302–50982573 (-)6.51e-11
Glyma.01G173000 hypothetical protein NA 1Chr01:51026937–51035200 (+)6.51e-11
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)1.395e-15
Glyma.01G176400 hypothetical protein AT1G63810:AT1G63810:nucleolar protein 1Chr01:51285599–51295173 (-)3.459e-13
Glyma.01G211800 hypothetical protein NA 1Chr01:54334961–54337099 (-)6.093e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)3.568e-11
Glyma.02G292200 hypothetical protein AT3G20475:MSH5:MUTS-homologue 5 1Chr02:47125531–47139234 (-)7.324e-11
Glyma.02G292500 hypothetical protein AT5G55070:AT5G55070:Dihydrolipoamide succinyltransferase 1Chr02:47153091–47160573 (+)7.324e-11
Glyma.02G293100 hypothetical protein AT3G20800:AT3G20800:Cell differentiation, Rcd1-like protein 1Chr02:47183443–47188007 (-)4.73e-12
Glyma.02G294200 hypothetical protein AT3G20290:EHD1:EPS15 homology domain 1 1Chr02:47256480–47263517 (+)3.611e-11
Glyma.02G294900 hypothetical protein AT5G55220:AT5G55220:trigger factor type chaperone family protein 1Chr02:47300149–47306133 (+)2.183e-11
Glyma.02G295000 hypothetical protein AT4G26770:AT4G26770:Phosphatidate cytidylyltransferase family protein 1Chr02:47306160–47312036 (-)2.183e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)3.834e-11
Glyma.04G234900 hypothetical protein AT5G53000:TAP46:2A phosphatase associated protein of 46 kD 1Chr04:50332008–50336222 (-)3.58e-12
Glyma.05G224200 hypothetical protein NA 1Chr05:40307329–40312025 (+)2.789e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)8.611e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)7.362e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)7.361e-11
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)2.062e-11
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)2.062e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.898e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.898e-12
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)9.202e-12
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)9.817e-12
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)6.877e-12
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)6.877e-12
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)6.877e-12
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)6.877e-12
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)6.877e-12
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)1.703e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)5.956e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)7.822e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.094e-12
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)2.601e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)3.607e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)8.498e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)8.498e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)3.484e-13
Glyma.18G052300 hypothetical protein NA 1Chr18:4521958–4525815 (+)8.202e-11
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)1.613e-14
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)1.979e-13
Glyma.20G084500 hypothetical protein AT2G33340:MAC3B:MOS4-associated complex 3B__AT1G04510:MAC3A:MOS4-associated complex 3A 1Chr20:31666190–31674959 (-)4.874e-13
Glyma.20G101700 hypothetical protein AT5G08580:AT5G08580:Calcium-binding EF hand family protein 1Chr20:34467936–34475476 (-)2.768e-14
Glyma.20G107900 hypothetical protein NA 1Chr20:35044042–35046452 (-)7.471e-12
Glyma.20G108000 hypothetical protein NA 1Chr20:35047833–35051623 (-)9.11e-12
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)9.943e-11
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)4.111e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)4.794e-16
Glyma.20G110000 hypothetical protein AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 1Chr20:35229423–35231861 (+)1.002e-12