Overview Annotation GWAS Evidence Associated genes

P34576

Metabolite ID
P34576
Deionized mass
625.2686 Da
Average m/z
626.2783
Average RT
17.4605
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
14
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

14 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G044600 hypothetical protein NA 1Chr02:4131829–4134877 (+)6.999e-12
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)8.549e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)8.549e-11
Glyma.09G060600 hypothetical protein AT3G28430:AT3G28430:CLEC16A-like protein 1Chr09:5661672–5675338 (-)8.326e-12
Glyma.09G209900 hypothetical protein AT1G31930:XLG3:extra-large GTP-binding protein 3 1Chr09:43412726–43419532 (+)4.171e-11
Glyma.12G183700 hypothetical protein AT2G27600:SKD1:AAA-type ATPase family protein 1Chr12:34470517–34477475 (-)9.144e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.589e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)3.589e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)3.589e-11
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)1.323e-13
Glyma.15G262100 hypothetical protein AT1G79550:PGK:phosphoglycerate kinase 1Chr15:49447943–49451741 (+)1.168e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)2.136e-11
Glyma.18G079000 hypothetical protein NA 1Chr18:7595306–7600287 (-)3.583e-11
Glyma.18G273900 hypothetical protein AT5G38900:AT5G38900:Thioredoxin superfamily protein 1Chr18:55658483–55661717 (+)3.764e-12