Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34249

Metabolite ID
P34249
Deionized mass
292.0918 Da
Average m/z
293.0994
Average RT
17.3357
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G096800 hypothetical protein AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2 4Chr04:8747857–8778229 (-)2.348e-11
Glyma.18G107900 hypothetical protein AT1G06490:CalS7:glucan synthase-like 7 3Chr18:12220182–12260477 (+)5.082e-13
Glyma.06G206000 hypothetical protein AT5G08110:AT5G08110:UBQ, helicase-c and DEAD-like helicase domain-containing protein 2Chr06:19693187–19711341 (-)5.495e-11
Glyma.06G209300 hypothetical protein NA 2Chr06:20573671–20581076 (-)5.853e-12
Glyma.03G022900 hypothetical protein NA 1Chr03:2409690–2420328 (-)1.961e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.493e-11
Glyma.03G136100 hypothetical protein NA 1Chr03:35199503–35203392 (-)1.224e-11
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 1Chr04:7187985–7192897 (+)8.701e-11
Glyma.04G096500 hypothetical protein NA 1Chr04:8664088–8675605 (+)2.348e-11
Glyma.04G096600 hypothetical protein AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4 1Chr04:8693806–8724007 (-)2.348e-11
Glyma.04G096900 hypothetical protein NA 1Chr04:8778953–8796458 (-)2.348e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)2.212e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)5.727e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)9.561e-15
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)7.521e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.268e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)6.82e-11
Glyma.06G204600 hypothetical protein NA 1Chr06:19307068–19316071 (-)4.625e-11
Glyma.06G204800 hypothetical protein AT1G18610:AT1G18610:Galactose oxidase/kelch repeat superfamily protein 1Chr06:19324767–19334540 (-)8.887e-11
Glyma.06G204900 hypothetical protein AT1G74120:AT1G74120:Mitochondrial transcription termination factor family protein 1Chr06:19353866–19354929 (+)8.887e-11
Glyma.06G205800 AP1A agamous-like MADS-box AT5G60910:AGL8:AGAMOUS-like 8 1Chr06:19583729–19590906 (+)5.495e-11
Glyma.06G207900 hypothetical protein NA 1Chr06:20278974–20282107 (-)1.362e-11
Glyma.06G208000 hypothetical protein AT1G74000:SS3:strictosidine synthase 3 1Chr06:20286288–20288769 (+)1.362e-11
Glyma.06G208900 hypothetical protein NA 1Chr06:20515068–20521900 (-)1.362e-11
Glyma.06G209400 hypothetical protein NA 1Chr06:20622369–20629712 (+)1.362e-11
Glyma.06G209600 hypothetical protein AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:20638577–20641470 (+)1.362e-11
Glyma.06G210000 hypothetical protein NA 1Chr06:20706632–20708144 (-)1.362e-11
Glyma.06G210100 hypothetical protein NA 1Chr06:20725481–20728890 (-)1.362e-11
Glyma.06G210400 hypothetical protein AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit 1Chr06:20768340–20778709 (-)1.362e-11
Glyma.06G210900 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 1Chr06:20942818–20945744 (+)1.362e-11
Glyma.06G211500 hypothetical protein AT5G19950:AT5G19950:tudor domain protein (DUF1767) 1Chr06:21104409–21114116 (-)1.362e-11
Glyma.06G211700 hypothetical protein NA 1Chr06:21226061–21226529 (-)3.899e-11
Glyma.06G211800 hypothetical protein NA 1Chr06:21237649–21239875 (+)3.899e-11
Glyma.06G213600 hypothetical protein NA 1Chr06:21713618–21726865 (+)3.899e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)2.091e-12
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)2.091e-12
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)2.091e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)3.907e-13
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)9.058e-11
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)2.351e-11
Glyma.18G045700 hypothetical protein NA 1Chr18:3956176–3958846 (+)1.637e-11
Glyma.18G107300 hypothetical protein NA 1Chr18:12091200–12095291 (-)3.832e-11
Glyma.18G107500 hypothetical protein NA 1Chr18:12116972–12118952 (+)3.693e-11
Glyma.18G108400 hypothetical protein NA 1Chr18:12370997–12390275 (-)6.031e-16
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)4.13e-13
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)3.086e-12
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)1.087e-11