Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34057

Metabolite ID
P34057
Deionized mass
643.2916 Da
Average m/z
644.2994
Average RT
17.2661
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
56
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

56 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)9.08e-11
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)2.631e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.094e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)3.65e-11
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)2.584e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)2.584e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)2.584e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)2.584e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)2.584e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)2.584e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)2.584e-11
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)9.08e-11
Glyma.01G234100 hypothetical protein AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein 1Chr01:56022128–56026001 (+)6.422e-11
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)2.42e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.129e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)3.818e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.88e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.526e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.5e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.227e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.227e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.13e-12
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)4.022e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)2.041e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)8.96e-13
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)3.407e-12
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)7.575e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.958e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)9.525e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)6.768e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)6.768e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)6.768e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)6.768e-12
Glyma.11G008600 hypothetical protein AT5G16680:AT5G16680:RING/FYVE/PHD zinc finger superfamily protein 1Chr11:596553–605827 (+)7.292e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)5.38e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.204e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.204e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.204e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.204e-12
Glyma.11G109900 hypothetical protein AT4G27630:GTG2:GPCR-type G protein 2 1Chr11:8378708–8386493 (-)8.612e-11
Glyma.11G179000 hypothetical protein AT2G27230:LHW:transcription factor-like protein 1Chr11:24412040–24417199 (+)1.798e-11
Glyma.11G184600 hypothetical protein AT4G08960:AT4G08960:phosphotyrosyl phosphatase activator (PTPA) family protein 1Chr11:25265163–25267323 (-)5.505e-11
Glyma.11G184900 hypothetical protein AT3G44530:HIRA:histone chaperone HIRA-like protein 1Chr11:25289268–25298978 (+)5.505e-11
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)4.065e-11
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)4.065e-11
Glyma.16G057500 hypothetical protein NA 1Chr16:5631176–5634867 (-)1.414e-12
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)2.345e-12
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:5656328–5663040 (-)3.409e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.62e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)4.397e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.686e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)5.616e-13
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)5.616e-13
Glyma.18G055400 hypothetical protein NA 1Chr18:4824726–4828902 (+)1.306e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)9.335e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)1.884e-11