Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34051

Metabolite ID
P34051
Deionized mass
798.3862 Da
Average m/z
799.3912
Average RT
17.2637
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
42
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

42 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 3Chr03:169480–172727 (+)1.501e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)3.222e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)3.222e-11
Glyma.15G140400 hypothetical protein NA 2Chr15:11495189–11495691 (+)1.358e-11
Glyma.15G140700 hypothetical protein NA 2Chr15:11520847–11522863 (-)4.919e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.345e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.345e-11
Glyma.02G006500 hypothetical protein AT4G01660:ABC1:ABC transporter 1 1Chr02:693193–700260 (+)3.831e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)1.972e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.321e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)6.974e-11
Glyma.05G233500 hypothetical protein NA 1Chr05:41066769–41067350 (-)8.289e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.582e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.824e-13
Glyma.07G067600 hypothetical protein NA 1Chr07:6091311–6093654 (-)2.72e-11
Glyma.07G136100 hypothetical protein NA 1Chr07:16113273–16117600 (+)4.717e-11
Glyma.07G136500 hypothetical protein AT3G53830:AT3G53830:Regulator of chromosome condensation (RCC1) family protein 1Chr07:16157535–16169721 (+)4.717e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)6.36e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)6.519e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)5.922e-12
Glyma.08G123500 hypothetical protein NA 1Chr08:9494946–9505931 (-)4.174e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)7.55e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.444e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.412e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.412e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)9.199e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)9.199e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.222e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.637e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.835e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.637e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.637e-13
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.183e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.019e-14
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)3.166e-15
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)8.726e-11
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)5.778e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.991e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)4.503e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)6.228e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)1.218e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)9.91e-11