Overview Annotation GWAS Evidence Associated genes

P33956

Metabolite ID
P33956
Deionized mass
549.3140 Da
Average m/z
550.3190
Average RT
17.2311
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
7
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

7 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)3.062e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)7.65e-11
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)1.572e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)5.322e-12
Glyma.20G127800 hypothetical protein AT2G15230:LIP1:lipase 1 1Chr20:36962266–36968300 (+)7.996e-12
Glyma.20G128100 hypothetical protein AT4G15490:UGT84A3:UDP-Glycosyltransferase superfamily protein__AT4G15500:UGT84A4:UDP-Glycosyltransferase superfamily pr… 1Chr20:36973656–36975687 (+)7.996e-12
Glyma.20G128200 hypothetical protein NA 1Chr20:36987719–36987998 (-)7.996e-12