Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P33830

Metabolite ID
P33830
Deionized mass
350.1152 Da
Average m/z
351.1238
Average RT
17.1686
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
77
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

77 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G086600 hypothetical protein NA 2Chr04:7374806–7380808 (+)1.044e-11
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)1.481e-13
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)3.502e-12
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)1.854e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)6.861e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)6.861e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)2.31e-11
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)7.819e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.992e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.992e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.743e-12
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)1.658e-11
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)1.581e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.248e-15
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.302e-11
Glyma.04G018000 hypothetical protein AT5G42310:AT5G42310:Pentatricopeptide repeat (PPR-like) superfamily protein 1Chr04:1402993–1407323 (-)8.224e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.735e-13
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)5.057e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)8.433e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)5.015e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)5.21e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)8.637e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.572e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)5.109e-15
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)5.109e-15
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)5.279e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)5.816e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)9.827e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)1.745e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)4.916e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)2.267e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)2.267e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)1.936e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)1.44e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)3.363e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)6.992e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.159e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.159e-11
Glyma.13G062200 hypothetical protein AT5G15270:AT5G15270:RNA-binding KH domain-containing protein 1Chr13:15985083–15991185 (-)1.284e-11
Glyma.13G062500 hypothetical protein NA 1Chr13:16016181–16019533 (-)1.284e-11
Glyma.13G062700 hypothetical protein AT3G01180:SS2:starch synthase 2 1Chr13:16045152–16059846 (-)2.067e-12
Glyma.13G062800 hypothetical protein AT5G48600:SMC3:structural maintenance of chromosome 3 1Chr13:16067222–16078901 (-)2.067e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.219e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.219e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.861e-13
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)9.486e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)6.122e-15
Glyma.14G119800 hypothetical protein AT1G43850:SEU:SEUSS transcriptional co-regulator 1Chr14:16751592–16763348 (-)1.837e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)2.31e-11
Glyma.15G024500 hypothetical protein AT3G13810:IDD11:indeterminate(ID)-domain 11 1Chr15:1970818–1978651 (-)4.312e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.936e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)5.31e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.936e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.936e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)1.339e-14
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)1.716e-11
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)6.453e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.473e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.412e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)8.028e-12
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)1.902e-13
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)9.122e-16
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)2.34e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)6.246e-11
Glyma.17G049700 hypothetical protein AT5G35570:AT5G35570:O-fucosyltransferase family protein 1Chr17:3775263–3781370 (+)2.714e-11
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)3.648e-11
Glyma.18G194900 hypothetical protein NA 1Chr18:46855096–46855729 (+)8.419e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 1Chr18:47102746–47129707 (+)8.263e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)1.857e-12
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)5.869e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)6.072e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)6.64e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.097e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.097e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.405e-11
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)8.159e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)8.881e-15