Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P33701

Metabolite ID
P33701
Deionized mass
392.0942 Da
Average m/z
393.0981
Average RT
17.1174
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.11G058500 hypothetical protein AT4G37190:AT4G37190:plasma membrane, autoregulation-binding site, misato segment II, myosin-like, tubulin/FtsZ protein 3Chr11:4417029–4423791 (-)5.891e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)9.776e-15
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)1.563e-12
Glyma.11G061000 hypothetical protein AT4G37210:AT4G37210:Tetratricopeptide repeat (TPR)-like superfamily protein 2Chr11:4576441–4579697 (+)1.081e-13
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)4.581e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.938e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)5.405e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)3.539e-11
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)6.208e-11
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)6.208e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)7.058e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)3.846e-12
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)9.133e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)4.269e-14
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)9.605e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.029e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.029e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.029e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.745e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.46e-16
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.916e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.664e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)9.048e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)2.783e-12
Glyma.11G048600 hypothetical protein AT5G67470:FH6:formin homolog 6 1Chr11:3634128–3639401 (-)9.119e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.906e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.906e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.906e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.906e-11
Glyma.11G060700 hypothetical protein NA 1Chr11:4569714–4571506 (+)5.463e-12
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.141e-11
Glyma.12G001400 hypothetical protein AT1G72090:AT1G72090:Methylthiotransferase 1Chr12:113763–118480 (+)2.606e-11
Glyma.12G001600 PM27 seed maturation protein PM27 AT1G22600:AT1G22600:Late embryosis abundant protein (LEA) family protein__AT1G72100:AT1G72100:late embryosis abundant d… 1Chr12:127545–128932 (+)2.606e-11
Glyma.12G001700 hypothetical protein AT1G22570:AT1G22570:Major facilitator superfamily protein__AT1G22550:AT1G22550:Major facilitator superfamily protein 1Chr12:132389–134935 (+)2.606e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)6.963e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)6.963e-13
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)3.567e-11
Glyma.14G149000 hypothetical protein NA 1Chr14:32164321–32167686 (+)5.131e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)4.533e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.021e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.932e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.02e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.02e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.761e-14
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)5.619e-12
Glyma.17G214600 hypothetical protein NA 1Chr17:36049053–36054871 (-)3.337e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.668e-11
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)6.056e-11
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)6.75e-11