Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P33621

Metabolite ID
P33621
Deionized mass
418.0890 Da
Average m/z
419.0959
Average RT
17.0860
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
57
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

57 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G090100 hypothetical protein NA 4Chr06:6985471–6996418 (+)5.957e-12
Glyma.14G206300 hypothetical protein AT1G06840:AT1G06840:Leucine-rich repeat protein kinase family protein 4Chr14:47152323–47167818 (+)5.546e-14
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 3Chr03:169480–172727 (+)1.074e-12
Glyma.06G090300 hypothetical protein AT1G09980:AT1G09980:Putative serine esterase family protein__AT1G58350:ZW18:Putative serine esterase family protein 2Chr06:7005790–7019054 (+)5.957e-12
Glyma.14G206200 hypothetical protein AT1G06840:AT1G06840:Leucine-rich repeat protein kinase family protein 2Chr14:47136840–47148766 (+)5.546e-14
Glyma.14G208500 hypothetical protein NA 2Chr14:47412802–47421148 (-)7.088e-31
Glyma.14G208900 hypothetical protein AT1G17200:AT1G17200:Uncharacterized protein family (UPF0497) 2Chr14:47451105–47454596 (-)5.504e-39
Glyma.14G209000 hypothetical protein NA 2Chr14:47461788–47463395 (+)5.504e-39
Glyma.14G210500 hypothetical protein AT3G03220:EXPA13:expansin A13 2Chr14:47550799–47553102 (-)5.235e-17
Glyma.14G210600 hypothetical protein AT5G17300:RVE1:Homeodomain-like superfamily protein 2Chr14:47557927–47561596 (-)1.17e-24
Glyma.14G211000 IDH1 AT1G65930:cICDH:cytosolic NADP+-dependent isocitrate dehydrogenase 2Chr14:47592207–47597473 (+)4.817e-18
Glyma.20G098600 hypothetical protein AT4G01470:TIP1;3:tonoplast intrinsic protein 1;3 2Chr20:34184591–34191923 (+)2.009e-16
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)2.382e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.078e-11
Glyma.03G001400 hypothetical protein AT2G38610:AT2G38610:RNA-binding KH domain-containing protein 1Chr03:160599–165525 (+)5.206e-12
Glyma.06G090200 hypothetical protein NA 1Chr06:6994887–6999658 (-)1.51e-11
Glyma.06G090400 hypothetical protein AT5G49650:XK-2:xylulose kinase-2 1Chr06:7022045–7025738 (+)1.51e-11
Glyma.06G091500 hypothetical protein NA 1Chr06:7175769–7178554 (-)1.081e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.131e-16
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)3.337e-12
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)1.881e-12
Glyma.12G212300 hypothetical protein AT3G58710:WRKY69:WRKY DNA-binding protein 69 1Chr12:37131153–37134096 (+)7.125e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)9.497e-12
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)1.966e-12
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)1.966e-12
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)2.494e-11
Glyma.14G206800 hypothetical protein NA 1Chr14:47208588–47212843 (-)8.304e-15
Glyma.14G206900 hypothetical protein NA 1Chr14:47215859–47220940 (-)8.304e-15
Glyma.14G207500 hypothetical protein NA 1Chr14:47331497–47335155 (-)7.127e-12
Glyma.14G207700 hypothetical protein AT5G17380:AT5G17380:Thiamine pyrophosphate dependent pyruvate decarboxylase family protein 1Chr14:47365910–47369153 (+)1.144e-21
Glyma.14G207800 hypothetical protein AT3G46940:DUT1:DUTP-PYROPHOSPHATASE-LIKE 1 1Chr14:47370774–47371971 (+)3.33e-12
Glyma.14G208100 hypothetical protein AT3G02680:NBS1:nijmegen breakage syndrome 1 1Chr14:47381562–47388756 (-)3.33e-12
Glyma.14G208400 hypothetical protein AT5G16360:AT5G16360:NC domain-containing protein-like protein 1Chr14:47403978–47407155 (-)1.074e-17
Glyma.14G208600 hypothetical protein NA 1Chr14:47437358–47439597 (-)5.504e-39
Glyma.14G208700 hypothetical protein NA 1Chr14:47442866–47447625 (-)5.504e-39
Glyma.14G209100 hypothetical protein NA 1Chr14:47464224–47465243 (+)1.486e-21
Glyma.14G209200 hypothetical protein NA 1Chr14:47466917–47468975 (+)5.504e-39
Glyma.14G209600 hypothetical protein NA 1Chr14:47485565–47488948 (-)5.504e-39
Glyma.14G209800 hypothetical protein AT5G17240:SDG40:SET domain group 40 1Chr14:47508042–47511868 (+)1.486e-21
Glyma.14G209900 hypothetical protein NA 1Chr14:47515899–47521687 (+)1.486e-21
Glyma.14G210000 hypothetical protein AT1G65910:NAC028:NAC domain containing protein 28 1Chr14:47524327–47529700 (-)5.235e-17
Glyma.14G210400 hypothetical protein AT3G03210:AT3G03210:Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein 1Chr14:47547994–47549987 (+)5.235e-17
Glyma.14G210700 hypothetical protein NA 1Chr14:47577189–47584929 (+)1.489e-13
Glyma.14G211100 hypothetical protein AT1G65960:GAD2:glutamate decarboxylase 2 1Chr14:47603425–47609079 (+)4.817e-18
Glyma.14G211800 hypothetical protein AT1G66080:AT1G66080:hikeshi-like protein 1Chr14:47664851–47670630 (+)8.434e-11
Glyma.16G075800 hypothetical protein AT4G19420:AT4G19420:Pectinacetylesterase family protein 1Chr16:7646131–7651379 (+)7.457e-13
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.12e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.312e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.647e-14
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)3.335e-14
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.35e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)1.35e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)7.257e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)7.257e-13
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)3.339e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)1.223e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)4.121e-12