Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P33498

Metabolite ID
P33498
Deionized mass
219.1323 Da
Average m/z
220.1397
Average RT
17.0464
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
53
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

53 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)8.923e-17
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.111e-11
Glyma.09G066400 hypothetical protein AT4G29790:AT4G29790:serine/arginine repetitive matrix protein 2Chr09:6509441–6524102 (+)7.953e-14
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.063e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)9.408e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)9.868e-14
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)1.56e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)5.917e-14
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)2.32e-14
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.749e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.032e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)6.363e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)8.595e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)4.61e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)4.61e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)4.61e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)4.521e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)6.464e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)6.464e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)2.345e-11
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)9.983e-11
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)9.983e-11
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)3.522e-12
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)3.522e-12
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)3.647e-12
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)8.521e-12
Glyma.08G115400 hypothetical protein NA 1Chr08:8848959–8851344 (+)6.335e-11
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 1Chr08:8868075–8876513 (+)2.041e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)1.272e-11
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)2.23e-11
Glyma.09G067600 hypothetical protein NA 1Chr09:6804057–6804365 (+)1.886e-13
Glyma.10G186500 PT7 NA 1Chr10:41946209–41950274 (-)7.988e-14
Glyma.10G187600 hypothetical protein NA 1Chr10:42055791–42063117 (-)6.66e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.68e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.68e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.147e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.147e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)9.204e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)9.204e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.987e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)7.075e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)7.075e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.111e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)7.357e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)9.868e-14
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)3.007e-11
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)1.152e-13
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)4.082e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.312e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)6.822e-12
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)1.563e-13
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)1.104e-11
Glyma.20G177500 hypothetical protein AT5G63220:AT5G63220:golgi-to-ER traffic-like protein 1Chr20:41470287–41483978 (+)1.205e-11