Overview Annotation GWAS Evidence Associated genes

P33433

Metabolite ID
P33433
Deionized mass
301.0950 Da
Average m/z
302.1022
Average RT
17.0336
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
4
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

4 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.034e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.034e-13
Glyma.13G354300 hypothetical protein AT5G65820:AT5G65820:Pentatricopeptide repeat (PPR) superfamily protein__AT3G49730:AT3G49730:Tetratricopeptide repeat (T… 1Chr13:44275405–44280066 (+)3.8e-11
Glyma.13G354600 hypothetical protein AT5G48120:MET18:ARM repeat superfamily protein 1Chr13:44288955–44301747 (+)3.8e-11