Overview Annotation GWAS Evidence Associated genes

P33339

Metabolite ID
P33339
Deionized mass
409.2809 Da
Average m/z
410.2852
Average RT
16.9993
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
21
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

21 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)1.421e-15
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)6.596e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.136e-12
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)8.852e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)8.852e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)8.852e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)4.541e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.374e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.374e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)8.084e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)8.529e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)9.764e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)8.529e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)8.529e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.487e-13
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.189e-13
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.189e-13
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)8.272e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)5.503e-11
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)8.272e-11
Glyma.18G100200 hypothetical protein NA 1Chr18:10512806–10522231 (+)8.272e-11