Overview Annotation GWAS Evidence Associated genes

P33262

Metabolite ID
P33262
Deionized mass
272.1629 Da
Average m/z
273.1706
Average RT
16.9680
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
52
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

52 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 3Chr19:1134716–1143232 (+)6.749e-12
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 2Chr03:1875182–1876855 (+)7.362e-12
Glyma.05G164700 hypothetical protein NA 2Chr05:35543931–35549196 (-)5.401e-13
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)9.818e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)3.851e-12
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)9.576e-12
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)7.331e-13
Glyma.03G019300 hypothetical protein NA 1Chr03:1952796–1975003 (+)6.259e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)2.901e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)2.597e-11
Glyma.03G169700 hypothetical protein AT2G20240:TRM17:GPI-anchored adhesin-like protein, putative (DUF3741)__AT4G28760:TRM20:methyl-coenzyme M reductase II s… 1Chr03:38442950–38448706 (+)1.964e-12
Glyma.03G173600 hypothetical protein AT3G53570:FC1:serine/threonine-protein kinase AFC1 1Chr03:38756369–38760896 (+)3.248e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)9.391e-13
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)5.321e-14
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)8.505e-14
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)8.505e-14
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.216e-14
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)7.19e-14
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)7.19e-14
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)7.19e-14
Glyma.05G165200 hypothetical protein NA 1Chr05:35586701–35592272 (+)1.296e-11
Glyma.05G165300 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr05:35593651–35600917 (+)1.296e-11
Glyma.05G166000 hypothetical protein NA 1Chr05:35657133–35657621 (-)1.296e-11
Glyma.05G166400 hypothetical protein NA 1Chr05:35692494–35699192 (+)4.16e-11
Glyma.05G182500 hypothetical protein AT5G65210:TGA1:bZIP transcription factor family protein 1Chr05:37029299–37037313 (+)9.634e-12
Glyma.05G182900 hypothetical protein NA 1Chr05:37056753–37057349 (-)9.634e-12
Glyma.05G183100 hypothetical protein AT5G64940:ATH13:ABC2 homolog 13 1Chr05:37059525–37070146 (-)9.634e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.788e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.788e-11
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)7.141e-11
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)7.141e-11
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)7.172e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)9.818e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)9.818e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)9.818e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)9.818e-12
Glyma.08G182400 hypothetical protein NA 1Chr08:14625596–14626713 (+)7.424e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)2.201e-11
Glyma.13G162300 hypothetical protein NA 1Chr13:27773991–27778719 (-)7.027e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)5.196e-13
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)2.881e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)5.689e-14
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)5.151e-12
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)1.539e-14
Glyma.16G039800 hypothetical protein NA 1Chr16:3730538–3733668 (-)3.389e-13
Glyma.16G040700 hypothetical protein AT3G03890:AT3G03890:FMN binding protein 1Chr16:3825551–3830340 (-)9.614e-11
Glyma.16G041000 hypothetical protein AT5G18140:AT5G18140:Chaperone DnaJ-domain superfamily protein 1Chr16:3852109–3856099 (+)9.614e-11
Glyma.16G041200 gdh1 AT3G03910:GDH3:glutamate dehydrogenase 3__AT5G18170:GDH1:glutamate dehydrogenase 1 1Chr16:3861427–3869280 (+)9.614e-11
Glyma.16G042100 hypothetical protein NA 1Chr16:3931670–3933390 (-)7.858e-11
Glyma.16G042200 hypothetical protein AT2G23840:AT2G23840:HNH endonuclease 1Chr16:3933842–3940818 (+)7.858e-11
Glyma.18G242900 hypothetical protein NA 1Chr18:53113341–53119592 (-)1.577e-11
Glyma.18G273000 hypothetical protein NA 1Chr18:55575628–55582063 (-)2.16e-13